Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.22□□□□□ -1.89
RFT1Q96AA3 AL109741.2-201ENST00000455561 343 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.22□□□□□ -1.89
RFT1Q96AA3 RPL7P5-201ENST00000471472 736 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 RN7SL442P-201ENST00000473804 320 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 AC020893.1-201ENST00000502452 580 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 FTH1P21-201ENST00000512179 511 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 AC022483.1-201ENST00000514020 567 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 RN7SKP13-201ENST00000515933 244 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 RNU6-528P-201ENST00000516926 100 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 AC103783.1-201ENST00000520506 373 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 AC135279.1-201ENST00000543493 504 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 OR4H12P-201ENST00000556269 907 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.22□□□□□ -1.89
RFT1Q96AA3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.22□□□□□ -1.89
RFT1Q96AA3 MIR4999-201ENST00000585029 91 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 AL606490.9-201ENST00000603331 271 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 AL390240.1-201ENST00000612950 384 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 MIR6130-201ENST00000619419 109 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 AC095031.1-201ENST00000623685 672 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 AC079416.3-201ENST00000624479 549 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 AC103706.2-201ENST00000638080 240 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 MIR492-201ENST00000638676 116 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.22□□□□□ -1.89
RFT1Q96AA3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
RFT1Q96AA3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RFT1Q96AA3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.22□□□□□ -1.89
RFT1Q96AA3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RFT1Q96AA3 FRG1BP-201ENST00000278882 761 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 SPRR2C-201ENST00000290702 219 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RFT1Q96AA3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 MIR30E-201ENST00000362104 92 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 RNU6-433P-201ENST00000363216 104 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 RNU6-289P-201ENST00000364093 107 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 CCDC58P2-201ENST00000417131 366 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 YPEL5P1-201ENST00000419731 367 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 MTATP6P4-201ENST00000427725 675 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 AL117339.2-201ENST00000430475 180 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 RSU1P2-202ENST00000437884 485 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 MTCYBP34-201ENST00000439552 670 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 RAC1P7-201ENST00000445367 377 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RFT1Q96AA3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 RPS3AP46-201ENST00000448352 682 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 PAXBP1P1-201ENST00000449315 447 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 RPL23AP35-201ENST00000451906 501 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 RPS4XP2-201ENST00000458402 793 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 AC091179.1-201ENST00000461606 579 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 RPL30P9-201ENST00000465586 330 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 AC104685.1-201ENST00000502445 371 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 HSPE1P23-201ENST00000509838 286 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 MTCYBP43-201ENST00000513621 740 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 RNU1-61P-201ENST00000516107 151 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 Y_RNA.688-201ENST00000516565 95 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 AP003497.1-201ENST00000528472 562 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 AL356057.1-201ENST00000533798 831 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 OR7K1P-201ENST00000546439 926 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RFT1Q96AA3 AL391156.1-201ENST00000554965 554 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 AC011451.2-201ENST00000604303 598 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 SNORA62.6-201ENST00000606322 83 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.21□□□□□ -1.9
RFT1Q96AA3 AL732372.2-225ENST00000642124 456 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 AP000526.1-201ENST00000603308 1388 ntBASIC3.21□□□□□ -1.9
RFT1Q96AA3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RFT1Q96AA3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RFT1Q96AA3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RFT1Q96AA3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RFT1Q96AA3 RPL21P132-201ENST00000331267 462 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 Y_RNA.318-201ENST00000365131 97 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 RNU6-1207P-201ENST00000384343 107 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RFT1Q96AA3 SOD2P1-201ENST00000396543 562 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms