Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 RPL23AP62-201ENST00000463396 453 ntBASIC3.12□□□□□ -1.91
TOPBP1Q92547 HAUS1P1-201ENST00000505275 832 ntBASIC3.12□□□□□ -1.91
TOPBP1Q92547 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.12□□□□□ -1.91
TOPBP1Q92547 OR8X1P-201ENST00000534542 869 ntBASIC3.12□□□□□ -1.91
TOPBP1Q92547 RPP40P2-201ENST00000603596 712 ntBASIC3.12□□□□□ -1.91
TOPBP1Q92547 MIR8081-201ENST00000611533 95 ntBASIC3.12□□□□□ -1.91
TOPBP1Q92547 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.12□□□□□ -1.91
TOPBP1Q92547 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TOPBP1Q92547 AL139811.1-201ENST00000424779 2299 ntBASIC3.12□□□□□ -1.91
TOPBP1Q92547 AC244517.1-201ENST00000606030 2086 ntBASIC3.11□□□□□ -1.91
TOPBP1Q92547 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TOPBP1Q92547 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.11□□□□□ -1.91
TOPBP1Q92547 AC129850.1-201ENST00000436203 508 ntBASIC3.11□□□□□ -1.91
TOPBP1Q92547 RNA5SP480-201ENST00000516840 109 ntBASIC3.11□□□□□ -1.91
TOPBP1Q92547 NPM1P52-201ENST00000518264 846 ntBASIC3.11□□□□□ -1.91
TOPBP1Q92547 AC025881.1-201ENST00000518851 512 ntBASIC3.11□□□□□ -1.91
TOPBP1Q92547 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.11□□□□□ -1.91
TOPBP1Q92547 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.11□□□□□ -1.91
TOPBP1Q92547 AC009452.1-201ENST00000640823 606 ntBASIC3.11□□□□□ -1.91
TOPBP1Q92547 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TOPBP1Q92547 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.1□□□□□ -1.91
TOPBP1Q92547 RNU2-20P-201ENST00000410425 191 ntBASIC3.1□□□□□ -1.91
TOPBP1Q92547 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.1□□□□□ -1.91
TOPBP1Q92547 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.1□□□□□ -1.91
TOPBP1Q92547 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.1□□□□□ -1.91
TOPBP1Q92547 RNA5SP490-201ENST00000517141 136 ntBASIC3.1□□□□□ -1.91
TOPBP1Q92547 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.1□□□□□ -1.91
TOPBP1Q92547 OR4P1P-201ENST00000530808 1136 ntBASIC3.1□□□□□ -1.91
TOPBP1Q92547 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.1□□□□□ -1.91
TOPBP1Q92547 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.1□□□□□ -1.91
TOPBP1Q92547 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.1□□□□□ -1.91
TOPBP1Q92547 AC114546.3-201ENST00000623582 1734 ntBASIC3.1□□□□□ -1.91
TOPBP1Q92547 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TOPBP1Q92547 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TOPBP1Q92547 AC069277.2-201ENST00000454211 432 ntBASIC3.09□□□□□ -1.91
TOPBP1Q92547 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.09□□□□□ -1.91
TOPBP1Q92547 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.09□□□□□ -1.91
TOPBP1Q92547 GZMAP1-201ENST00000503054 631 ntBASIC3.09□□□□□ -1.91
TOPBP1Q92547 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.09□□□□□ -1.91
TOPBP1Q92547 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TOPBP1Q92547 AC073348.1-201ENST00000623002 331 ntBASIC3.09□□□□□ -1.91
TOPBP1Q92547 RNU6-392P-201ENST00000364926 101 ntBASIC3.09□□□□□ -1.92
TOPBP1Q92547 RNU6-673P-201ENST00000365084 104 ntBASIC3.09□□□□□ -1.92
TOPBP1Q92547 RPS7P9-201ENST00000414704 586 ntBASIC3.09□□□□□ -1.92
TOPBP1Q92547 AC104332.2-201ENST00000429959 156 ntBASIC3.09□□□□□ -1.92
TOPBP1Q92547 USP9YP7-201ENST00000436723 430 ntBASIC3.09□□□□□ -1.92
TOPBP1Q92547 USP9YP32-201ENST00000452432 430 ntBASIC3.09□□□□□ -1.92
TOPBP1Q92547 AC104435.1-201ENST00000483483 166 ntBASIC3.09□□□□□ -1.92
TOPBP1Q92547 TTC39CP1-201ENST00000512513 755 ntBASIC3.09□□□□□ -1.92
TOPBP1Q92547 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.09□□□□□ -1.92
TOPBP1Q92547 IGHV3-76-201ENST00000522465 295 ntBASIC3.09□□□□□ -1.92
TOPBP1Q92547 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.09□□□□□ -1.92
TOPBP1Q92547 VN1R74P-201ENST00000613259 503 ntBASIC3.09□□□□□ -1.92
TOPBP1Q92547 AC010297.1-201ENST00000623948 149 ntBASIC3.09□□□□□ -1.92
TOPBP1Q92547 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
TOPBP1Q92547 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TOPBP1Q92547 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TOPBP1Q92547 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
TOPBP1Q92547 RNU1-57P-201ENST00000384491 166 ntBASIC3.08□□□□□ -1.92
TOPBP1Q92547 RPL21P75-201ENST00000396599 483 ntBASIC3.08□□□□□ -1.92
TOPBP1Q92547 RPL21P1-201ENST00000399532 476 ntBASIC3.08□□□□□ -1.92
TOPBP1Q92547 RPL21P28-201ENST00000401418 483 ntBASIC3.08□□□□□ -1.92
TOPBP1Q92547 AL592114.1-201ENST00000403842 483 ntBASIC3.08□□□□□ -1.92
TOPBP1Q92547 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC3.08□□□□□ -1.92
TOPBP1Q92547 CFTRP1-201ENST00000456646 183 ntBASIC3.08□□□□□ -1.92
TOPBP1Q92547 RPL21P16-201ENST00000495531 483 ntBASIC3.08□□□□□ -1.92
TOPBP1Q92547 AC107393.1-201ENST00000512403 346 ntBASIC3.08□□□□□ -1.92
TOPBP1Q92547 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.08□□□□□ -1.92
TOPBP1Q92547 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.08□□□□□ -1.92
TOPBP1Q92547 MIR3670-2-201ENST00000582974 65 ntBASIC3.08□□□□□ -1.92
TOPBP1Q92547 MIR3670-1-201ENST00000584160 65 ntBASIC3.08□□□□□ -1.92
TOPBP1Q92547 MIR3670-3-201ENST00000584855 65 ntBASIC3.08□□□□□ -1.92
TOPBP1Q92547 RN7SL622P-201ENST00000585292 275 ntBASIC3.08□□□□□ -1.92
TOPBP1Q92547 MIR3670-4-201ENST00000612260 65 ntBASIC3.08□□□□□ -1.92
TOPBP1Q92547 MTCO1P14-201ENST00000441695 1559 ntBASIC3.07□□□□□ -1.92
TOPBP1Q92547 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.07□□□□□ -1.92
TOPBP1Q92547 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.07□□□□□ -1.92
TOPBP1Q92547 HMGB3P15-201ENST00000507326 574 ntBASIC3.07□□□□□ -1.92
TOPBP1Q92547 RNU6-347P-201ENST00000516658 105 ntBASIC3.07□□□□□ -1.92
TOPBP1Q92547 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
TOPBP1Q92547 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.07□□□□□ -1.92
TOPBP1Q92547 ARL2BPP2-201ENST00000550907 489 ntBASIC3.07□□□□□ -1.92
TOPBP1Q92547 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.07□□□□□ -1.92
TOPBP1Q92547 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.07□□□□□ -1.92
TOPBP1Q92547 AP001542.2-201ENST00000593141 364 ntBASIC3.07□□□□□ -1.92
TOPBP1Q92547 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.07□□□□□ -1.92
TOPBP1Q92547 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TOPBP1Q92547 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TOPBP1Q92547 SAR1AP4-201ENST00000429225 591 ntBASIC3.06□□□□□ -1.92
TOPBP1Q92547 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.06□□□□□ -1.92
TOPBP1Q92547 TRAV31-201ENST00000502780 342 ntBASIC3.06□□□□□ -1.92
TOPBP1Q92547 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TOPBP1Q92547 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.06□□□□□ -1.92
TOPBP1Q92547 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.06□□□□□ -1.92
TOPBP1Q92547 AL592494.3-201ENST00000609485 464 ntBASIC3.06□□□□□ -1.92
TOPBP1Q92547 AC099778.2-201ENST00000610904 211 ntBASIC3.06□□□□□ -1.92
TOPBP1Q92547 RNU6-697P-201ENST00000363348 107 ntBASIC3.05□□□□□ -1.92
TOPBP1Q92547 RNU2-68P-201ENST00000410878 191 ntBASIC3.05□□□□□ -1.92
TOPBP1Q92547 RPL23AP39-201ENST00000415533 405 ntBASIC3.05□□□□□ -1.92
TOPBP1Q92547 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms