Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 RNU6-1220P-201ENST00000517126 108 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AC107934.1-201ENST00000522215 217 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AC022616.3-201ENST00000523940 148 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 HMGB1P6-201ENST00000569046 646 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AC005668.1-201ENST00000571142 476 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AL355816.1-201ENST00000607951 118 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AL354950.2-201ENST00000617939 290 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AC114546.3-201ENST00000623582 1734 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AL121839.2-201ENST00000565058 6943 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 RPL7P26-201ENST00000333817 754 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 RNU6-525P-201ENST00000363685 104 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 U8.11-201ENST00000384699 133 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 U8.12-201ENST00000384701 133 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 RNU6-510P-201ENST00000391239 108 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 RPL31P52-201ENST00000407532 367 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 AC009161.1-201ENST00000417306 376 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 AC068533.1-201ENST00000418542 415 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 SETP9-201ENST00000423837 832 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 AC006548.1-201ENST00000427470 102 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 AC091286.1-201ENST00000431233 461 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 GPR143P-201ENST00000434155 205 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 AC006011.1-201ENST00000442758 349 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 AC005297.2-201ENST00000450430 606 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 U8.18-201ENST00000459285 133 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 RNU6-352P-201ENST00000516908 107 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 BTF3P12-201ENST00000519620 469 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 AC107953.1-201ENST00000522216 297 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 AC018442.3-201ENST00000523025 183 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 OR4R1P-201ENST00000529879 463 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 AL356432.3-201ENST00000568952 465 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 HMGB2P1-201ENST00000591146 634 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 AC007179.3-201ENST00000604976 235 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 AL592436.1-201ENST00000605135 558 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 AC015871.5-202ENST00000623252 701 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 CR381572.1-201ENST00000625098 102 ntBASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LINC00116Q8NCU8 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 AL161781.1-201ENST00000354277 403 ntBASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 RNU6-1097P-201ENST00000363586 107 ntBASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 RNU6-108P-201ENST00000365558 107 ntBASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 MIR7-3-201ENST00000384898 110 ntBASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 TXNP7-201ENST00000406296 293 ntBASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 RN7SKP167-201ENST00000411047 285 ntBASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 RPS15AP12-201ENST00000419498 388 ntBASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 PDSS1P1-201ENST00000422953 1114 ntBASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 AP1S2P1-201ENST00000457344 379 ntBASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 RNU7-63P-201ENST00000459054 62 ntBASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 AC233702.1-201ENST00000482905 502 ntBASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 HMGB3P16-201ENST00000508037 287 ntBASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 AC005255.1-201ENST00000593748 216 ntBASIC5.29□□□□□ -1.56
LINC00116Q8NCU8 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms