Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 TMEM251P1-201ENST00000503717 318 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.44□□□□□ -1.86
RTL3Q8N8U3 HMGB1P28-201ENST00000507778 552 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 CBX3P3-201ENST00000508108 532 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 APOOP4-201ENST00000513530 597 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 RN7SKP60-201ENST00000516985 239 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 RNU6-711P-201ENST00000517255 106 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 MIR4276-201ENST00000584832 70 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.44□□□□□ -1.86
RTL3Q8N8U3 ELOCP35-201ENST00000604289 336 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 AC025811.1-201ENST00000604312 472 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 AC007349.4-201ENST00000608114 532 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 TUG1_1.1-201ENST00000610654 145 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 AL356321.1-201ENST00000621360 228 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.44□□□□□ -1.86
RTL3Q8N8U3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
RTL3Q8N8U3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RTL3Q8N8U3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 SNORD116.1-201ENST00000365628 92 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 RNU6-882P-201ENST00000391025 103 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AL136372.1-201ENST00000403060 228 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AL356131.1-201ENST00000405826 414 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 FAT1P1-201ENST00000406588 507 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 BEND7P1-201ENST00000422058 457 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AC233728.2-201ENST00000425348 757 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 EZH2P1-201ENST00000431167 291 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 RPL7P34-201ENST00000433316 712 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 RAC1P7-201ENST00000445367 377 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 RNA5SP310-201ENST00000459084 116 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 RPL21P10-201ENST00000463521 490 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AC004263.1-201ENST00000479327 332 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 VN1R104P-201ENST00000505115 1009 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 RN7SKP31-201ENST00000516354 278 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 MTND2P38-201ENST00000522536 667 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 NCAPGP2-201ENST00000557911 754 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AC061975.8-201ENST00000587058 721 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 DUXAP11-201ENST00000603858 526 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AC069304.2-201ENST00000605154 435 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 MIR92B-201ENST00000607575 96 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AP002826.1-201ENST00000608835 315 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AC004908.3-201ENST00000610248 625 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AL592295.2-201ENST00000612578 206 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AL392048.1-201ENST00000613946 534 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AC025588.4-201ENST00000615802 908 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AC012314.7-201ENST00000619693 93 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 SNORD39.4-201ENST00000620099 78 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AC022509.4-201ENST00000621404 572 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AP002782.1-201ENST00000623107 614 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 MIR7153-201ENST00000637758 57 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 AL356473.1-201ENST00000406203 1408 ntBASIC3.43□□□□□ -1.86
RTL3Q8N8U3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RTL3Q8N8U3 CUL1P1-201ENST00000509510 2425 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
RTL3Q8N8U3 Z83843.1-201ENST00000604070 3685 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 SNORD113-6-201ENST00000363345 75 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 RNU6-413P-201ENST00000384115 107 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 RNU1-101P-201ENST00000391171 127 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 RPS3AP26-201ENST00000398259 784 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.42□□□□□ -1.86
RTL3Q8N8U3 ATP5C1P1-201ENST00000441945 895 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AC007327.1-201ENST00000447461 264 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AC011979.1-201ENST00000472300 483 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 MTND2P14-201ENST00000482139 351 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.42□□□□□ -1.86
RTL3Q8N8U3 WBP1LP4-201ENST00000505043 344 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AC034244.1-201ENST00000507687 207 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.42□□□□□ -1.86
RTL3Q8N8U3 OR5AK1P-201ENST00000524837 922 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms