Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 AC114774.1-201ENST00000507410 1770 ntBASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 Y_RNA.512-201ENST00000384518 102 ntBASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 HMGN1P2-201ENST00000445197 310 ntBASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 AL589765.3-201ENST00000446084 462 ntBASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 AC092865.4-201ENST00000477936 615 ntBASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 HSPE1P6-201ENST00000479457 291 ntBASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 AC083829.1-201ENST00000503756 657 ntBASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 AC018797.1-201ENST00000510791 255 ntBASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 KHDC1P1-201ENST00000511053 508 ntBASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 RNU6-1315P-201ENST00000517187 99 ntBASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 AP004609.2-201ENST00000532177 190 ntBASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 CPDP1-201ENST00000579660 283 ntBASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 MIR4502-201ENST00000580432 81 ntBASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 MIR4273-201ENST00000582824 84 ntBASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.55□□□□□ -1.52
DEPDC4Q8N2C3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 MAPK10-304ENST00000641341 3984 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 RNU6-472P-201ENST00000384299 107 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 Y_RNA.551-201ENST00000384661 102 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 RPL11P3-201ENST00000395256 523 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 AP000580.1-201ENST00000404439 358 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 RN7SKP279-201ENST00000411383 298 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 DPPA2P3-201ENST00000411853 655 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 MYL6P5-201ENST00000412707 459 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 OR2AH1P-201ENST00000425717 928 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 AL451062.2-201ENST00000427515 271 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 HSPD1P21-201ENST00000436541 245 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 RPL12P18-201ENST00000437175 325 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 AL583843.1-201ENST00000456070 346 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 AC009963.3-201ENST00000458090 486 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 RN7SL369P-201ENST00000477138 299 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 SUMO2P6-201ENST00000505273 288 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 AC113155.1-201ENST00000511141 769 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 RNU6-143P-201ENST00000516942 93 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 AL133399.1-201ENST00000527476 298 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 AC023157.2-201ENST00000540596 141 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 RNU4ATAC-201ENST00000580972 127 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 AP000787.2-201ENST00000604432 568 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 MIR6729-201ENST00000618194 65 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 AC025031.4-201ENST00000621248 3271 ntBASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.54□□□□□ -1.52
DEPDC4Q8N2C3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 UBE2L2-201ENST00000254302 429 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 RNY1P16-201ENST00000363063 111 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 RNA5SP433-201ENST00000364491 114 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 RNU6-395P-201ENST00000365662 106 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms