Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SKA3Q8IX90 AL592310.1-201ENST00000414330 671 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 ATP5F1P1-201ENST00000433775 569 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 AC084290.1-201ENST00000434995 374 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 HMGB3P11-201ENST00000440127 604 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 RPL7P52-201ENST00000449200 742 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 RPS24P6-201ENST00000452670 400 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 PRSS3P4-201ENST00000453323 162 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 USP9YP25-201ENST00000457708 443 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 AC118282.1-201ENST00000506408 765 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 AC006390.1-201ENST00000508068 283 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 AC079395.1-201ENST00000510981 262 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 AC010625.1-201ENST00000511296 403 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 RNU6-311P-201ENST00000516224 102 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 SNORA31.26-201ENST00000517250 137 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SKA3Q8IX90 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 AL121603.1-201ENST00000553815 142 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 HSPE1P3-201ENST00000559254 309 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 AL512347.1-201ENST00000566420 503 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 AC055876.1-202ENST00000567053 138 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 MTCO3P24-201ENST00000572729 782 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 AC053481.3-201ENST00000577881 843 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 AL590282.1-201ENST00000610379 1136 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 AC091046.2-201ENST00000620775 665 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 AC073476.4-201ENST00000628409 72 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 AC084035.1-201ENST00000634543 607 ntBASIC2.88□□□□□ -1.95
SKA3Q8IX90 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SKA3Q8IX90 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SKA3Q8IX90 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.88□□□□□ -1.95
SKA3Q8IX90 AL136164.4-201ENST00000625013 2135 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SKA3Q8IX90 AL049780.3-201ENST00000624612 1583 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SKA3Q8IX90 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 SNORD51-201ENST00000384320 80 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 RPL23AP29-201ENST00000397284 453 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 DHFRP6-201ENST00000401776 268 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 MTCO3P12-201ENST00000416718 547 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC019178.2-201ENST00000423595 505 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 CST9LP2-201ENST00000437612 320 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC005297.2-201ENST00000450430 606 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 NECAP1P2-201ENST00000455668 727 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC114981.1-201ENST00000503897 678 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC091951.3-201ENST00000504093 246 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC020699.1-201ENST00000505161 445 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 XKRY-201ENST00000510392 1100 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC116353.3-201ENST00000511215 249 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 RN7SKP282-201ENST00000516824 299 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 HIGD1AP1-201ENST00000550979 275 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC009712.1-201ENST00000564938 316 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC022662.1-201ENST00000580252 331 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC012669.1-201ENST00000603209 283 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC009220.3-201ENST00000604318 586 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC010738.1-201ENST00000604970 987 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC055876.5-201ENST00000605667 259 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 MIR92B-201ENST00000607575 96 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC007349.4-201ENST00000608114 532 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC006386.1-201ENST00000619436 415 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms