Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MTCO1P9-201ENST00000505577 1534 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 AC006020.1-201ENST00000420179 1854 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
VRK3Q8IV63 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VRK3Q8IV63 Y_RNA.384-201ENST00000383909 102 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 Y_RNA.387-201ENST00000383918 102 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 RNU6-921P-201ENST00000384361 107 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 MIR559-201ENST00000385188 96 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 AL121834.1-202ENST00000404494 277 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 MIR548P-201ENST00000408336 84 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 AL645937.1-202ENST00000421799 937 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VRK3Q8IV63 MTND3P2-201ENST00000438452 342 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 HMGB1P18-201ENST00000438801 619 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 FGF7P3-201ENST00000454645 303 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 AC005008.1-201ENST00000456151 612 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 AL356010.1-201ENST00000456364 102 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 MTCO2P29-201ENST00000465212 189 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 AC233702.1-201ENST00000482905 502 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 AC012158.1-204ENST00000483430 465 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 SOD1P3-201ENST00000518682 454 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 SUB1P1-201ENST00000524415 382 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 SCOCP1-201ENST00000554676 349 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 AC005191.1-201ENST00000603950 358 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 AC121334.2-201ENST00000605387 271 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 AL391813.2-201ENST00000609113 322 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 AL021997.2-201ENST00000615674 271 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 AL138721.1-201ENST00000616756 179 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 uc_338.13-201ENST00000618243 179 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VRK3Q8IV63 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
VRK3Q8IV63 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.26□□□□□ -1.73
VRK3Q8IV63 AC134882.1-201ENST00000603738 1676 ntBASIC4.26□□□□□ -1.73
VRK3Q8IV63 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VRK3Q8IV63 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC092162.3-201ENST00000624511 1624 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC126755.2-208ENST00000327792 462 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC138969.1-213ENST00000331436 462 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 Y_RNA.144-201ENST00000363521 113 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 RN7SKP224-201ENST00000364140 325 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 Y_RNA.216-201ENST00000364205 93 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VRK3Q8IV63 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 RNA5SP372-201ENST00000390836 115 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 SNORD66.1-201ENST00000391230 76 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 SNORA11F-201ENST00000408237 128 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC073136.2-201ENST00000417282 849 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC009161.1-201ENST00000417306 376 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 RPS29P17-201ENST00000430795 166 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
VRK3Q8IV63 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 GPR143P-201ENST00000434155 205 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 GTF2IP13-201ENST00000438487 386 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AL049734.2-201ENST00000441066 616 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 HMGN2P26-201ENST00000463169 339 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC130509.1-201ENST00000464158 433 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC011276.1-201ENST00000469688 323 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC006463.2-201ENST00000473326 348 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AP001025.2-201ENST00000490908 477 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 RN7SL810P-201ENST00000493031 276 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 RN7SL812P-201ENST00000493791 279 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 KLHL2P1-201ENST00000508691 521 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC021146.3-201ENST00000511911 260 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC015795.1-201ENST00000513669 327 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 RNU6-1220P-201ENST00000517126 108 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AF186190.1-201ENST00000517470 480 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 BTF3P12-201ENST00000519620 469 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 IGLV3-26-201ENST00000520756 302 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms