Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 SNORA31-201ENST00000362607 130 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 RNU6-1078P-201ENST00000364522 103 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 SNORD82-201ENST00000365530 70 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 MIR513B-201ENST00000385136 84 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AL023807.1-201ENST00000407932 359 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 RNU6-920P-201ENST00000410926 92 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC018630.2-202ENST00000422992 927 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 RNU7-136P-201ENST00000458819 69 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 RPS3AP43-201ENST00000479743 781 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC096576.1-201ENST00000489014 359 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC021146.1-201ENST00000511202 716 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 MTND5P4-201ENST00000514978 288 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 HIGD1AP3-201ENST00000515857 278 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 OR8L1P-201ENST00000534005 955 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 MTND3P12-201ENST00000559068 328 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 MTCYBP28-201ENST00000566728 1132 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC055876.5-201ENST00000605667 259 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AL592295.2-201ENST00000612578 206 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC110801.1-201ENST00000623590 212 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC019226.2-201ENST00000625973 424 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 RNU6-263P-201ENST00000363811 107 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 Y_RNA.560-201ENST00000384689 102 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 RNU6-328P-201ENST00000390887 106 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 RNU4-47P-201ENST00000410876 114 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 RNA5SP31-201ENST00000411144 127 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC092634.6-201ENST00000418558 192 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 BEND7P1-201ENST00000422058 457 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AL139132.1-201ENST00000431587 344 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 USP9YP7-201ENST00000436723 430 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 USP9YP32-201ENST00000452432 430 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 DNAJC19P1-201ENST00000455312 319 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 RNU7-59P-201ENST00000459101 61 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC087312.1-201ENST00000471411 480 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 FAM172BP-201ENST00000487497 1089 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC020893.1-201ENST00000502452 580 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC110794.1-201ENST00000505816 425 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 OR4R3P-201ENST00000525084 838 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 OR4P1P-201ENST00000530808 1136 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AC145350.1-201ENST00000567426 208 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 MIR4738-201ENST00000579134 87 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AL157817.1-201ENST00000614264 790 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 AP003485.2-201ENST00000623636 610 ntBASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RAI1Q7Z5J4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.79□□□□□ -1.96
RAI1Q7Z5J4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.79□□□□□ -1.96
RAI1Q7Z5J4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
RAI1Q7Z5J4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.79□□□□□ -1.96
RAI1Q7Z5J4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
RAI1Q7Z5J4 RNU6-723P-201ENST00000383973 107 ntBASIC2.79□□□□□ -1.96
RAI1Q7Z5J4 SNORD51-201ENST00000384320 80 ntBASIC2.79□□□□□ -1.96
RAI1Q7Z5J4 RNU6-636P-201ENST00000384598 107 ntBASIC2.79□□□□□ -1.96
RAI1Q7Z5J4 TXNP7-201ENST00000406296 293 ntBASIC2.79□□□□□ -1.96
RAI1Q7Z5J4 RNU2-15P-201ENST00000410692 191 ntBASIC2.79□□□□□ -1.96
RAI1Q7Z5J4 AC009237.2-201ENST00000421358 284 ntBASIC2.79□□□□□ -1.96
RAI1Q7Z5J4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.79□□□□□ -1.96
RAI1Q7Z5J4 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.79□□□□□ -1.96
RAI1Q7Z5J4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.79□□□□□ -1.96
RAI1Q7Z5J4 AC092757.1-201ENST00000467293 467 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms