Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.34□□□□□ -2.2
CSMD3Q7Z407 MTND5P35-201ENST00000557537 1720 ntBASIC1.34□□□□□ -2.2
CSMD3Q7Z407 AC107015.1-201ENST00000466902 747 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.33□□□□□ -2.2
CSMD3Q7Z407 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 RNA5SP102-201ENST00000516865 106 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 AL161670.1-201ENST00000554348 137 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.33□□□□□ -2.2
CSMD3Q7Z407 RPAP2P1-201ENST00000603626 1168 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 AP000787.2-201ENST00000604432 568 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 AC126118.1-201ENST00000607744 628 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.33□□□□□ -2.2
CSMD3Q7Z407 RNU1-51P-201ENST00000365345 176 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 RNU7-157P-201ENST00000459600 66 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 AP000852.1-201ENST00000472460 573 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.33□□□□□ -2.2
CSMD3Q7Z407 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.33□□□□□ -2.2
CSMD3Q7Z407 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
CSMD3Q7Z407 BX248123.2-201ENST00000606318 124 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC1.33□□□□□ -2.2
CSMD3Q7Z407 AC091152.2-201ENST00000591628 2569 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 TRAPPC2P10-201ENST00000415662 323 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 AL358075.3-201ENST00000426289 226 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.33□□□□□ -2.2
CSMD3Q7Z407 MED6P1-201ENST00000439659 713 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 NDUFS5P3-201ENST00000450668 321 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.33□□□□□ -2.2
CSMD3Q7Z407 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.33□□□□□ -2.2
CSMD3Q7Z407 AC007536.1-201ENST00000533382 349 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC1.33□□□□□ -2.2
CSMD3Q7Z407 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.33□□□□□ -2.2
CSMD3Q7Z407 AC025281.1-201ENST00000567026 265 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 NF1P5-201ENST00000588287 448 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.33□□□□□ -2.2
CSMD3Q7Z407 AC009452.1-201ENST00000640823 606 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 AC022336.2-201ENST00000568966 2538 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 API5P2-201ENST00000397055 1498 ntBASIC1.33□□□□□ -2.2
CSMD3Q7Z407 SNORA51.4-201ENST00000364993 124 ntBASIC1.32□□□□□ -2.2
CSMD3Q7Z407 SNORA67.5-201ENST00000391036 107 ntBASIC1.32□□□□□ -2.2
CSMD3Q7Z407 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.32□□□□□ -2.2
CSMD3Q7Z407 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.32□□□□□ -2.2
CSMD3Q7Z407 HSPE1P28-201ENST00000443139 211 ntBASIC1.32□□□□□ -2.2
CSMD3Q7Z407 AC009237.8-201ENST00000445492 379 ntBASIC1.32□□□□□ -2.2
CSMD3Q7Z407 SSXP1-201ENST00000453640 473 ntBASIC1.32□□□□□ -2.2
CSMD3Q7Z407 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.32□□□□□ -2.2
CSMD3Q7Z407 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.32□□□□□ -2.2
CSMD3Q7Z407 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.32□□□□□ -2.2
CSMD3Q7Z407 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
CSMD3Q7Z407 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
CSMD3Q7Z407 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CSMD3Q7Z407 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.32□□□□□ -2.2
CSMD3Q7Z407 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
CSMD3Q7Z407 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.32□□□□□ -2.2
CSMD3Q7Z407 AL591719.1-201ENST00000444669 744 ntBASIC1.32□□□□□ -2.2
CSMD3Q7Z407 SNRPFP4-201ENST00000456366 242 ntBASIC1.32□□□□□ -2.2
CSMD3Q7Z407 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.32□□□□□ -2.2
CSMD3Q7Z407 AL512598.1-201ENST00000610158 273 ntBASIC1.32□□□□□ -2.2
CSMD3Q7Z407 Y_RNA.783-201ENST00000613546 102 ntBASIC1.32□□□□□ -2.2
CSMD3Q7Z407 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.32□□□□□ -2.2
CSMD3Q7Z407 AC114546.3-201ENST00000623582 1734 ntBASIC1.32□□□□□ -2.2
CSMD3Q7Z407 RNA5SP295-201ENST00000362655 121 ntBASIC1.32□□□□□ -2.2
CSMD3Q7Z407 MIR1294-201ENST00000408503 142 ntBASIC1.32□□□□□ -2.2
CSMD3Q7Z407 RNU4-74P-201ENST00000411280 161 ntBASIC1.32□□□□□ -2.2
CSMD3Q7Z407 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC1.32□□□□□ -2.2
CSMD3Q7Z407 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.32□□□□□ -2.2
CSMD3Q7Z407 AL645939.1-201ENST00000453429 797 ntBASIC1.32□□□□□ -2.2
CSMD3Q7Z407 PSMA3P-201ENST00000555485 635 ntBASIC1.32□□□□□ -2.2
CSMD3Q7Z407 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.32□□□□□ -2.2
CSMD3Q7Z407 MIR6132-201ENST00000622083 109 ntBASIC1.32□□□□□ -2.2
CSMD3Q7Z407 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
CSMD3Q7Z407 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CSMD3Q7Z407 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC1.32□□□□□ -2.2
CSMD3Q7Z407 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 RNU6-1-201ENST00000383898 107 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 RNU6-42P-201ENST00000384165 107 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 RNU6-36P-201ENST00000384172 107 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 RNU6-4P-201ENST00000384205 107 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 RNU6-5P-201ENST00000384238 107 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 RNU6-3P-201ENST00000384314 107 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 RNU6-2-201ENST00000384627 107 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 RNU6-9-201ENST00000384776 107 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 RNU6-33P-201ENST00000384793 107 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 RNU6-6P-201ENST00000606623 107 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 AC012531.5-201ENST00000611375 151 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 AL359740.1-201ENST00000624340 592 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 RNU6-1263P-201ENST00000384601 106 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 FAM35CP-201ENST00000554755 2470 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 ERHP2-201ENST00000402323 299 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 DHFRP5-201ENST00000406944 564 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms