Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC244505.4-201ENST00000434905 287 ntBASIC1.46□□□□□ -2.18
VPS13CQ709C8 AL513321.1-201ENST00000441175 761 ntBASIC1.46□□□□□ -2.18
VPS13CQ709C8 SSXP5-201ENST00000443473 287 ntBASIC1.46□□□□□ -2.18
VPS13CQ709C8 SNRPFP4-201ENST00000456366 242 ntBASIC1.46□□□□□ -2.18
VPS13CQ709C8 AC025033.1-201ENST00000463883 194 ntBASIC1.46□□□□□ -2.18
VPS13CQ709C8 OR10D4P-201ENST00000525892 951 ntBASIC1.46□□□□□ -2.18
VPS13CQ709C8 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.46□□□□□ -2.18
VPS13CQ709C8 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.46□□□□□ -2.18
VPS13CQ709C8 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
VPS13CQ709C8 MTND5P3-201ENST00000438536 1800 ntBASIC1.46□□□□□ -2.18
VPS13CQ709C8 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.46□□□□□ -2.18
VPS13CQ709C8 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
VPS13CQ709C8 AC095050.2-201ENST00000510748 1458 ntBASIC1.46□□□□□ -2.18
VPS13CQ709C8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
VPS13CQ709C8 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.46□□□□□ -2.18
VPS13CQ709C8 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.46□□□□□ -2.18
VPS13CQ709C8 AL451049.1-201ENST00000608672 497 ntBASIC1.46□□□□□ -2.18
VPS13CQ709C8 OR1S1-201ENST00000624470 978 ntBASIC1.46□□□□□ -2.18
VPS13CQ709C8 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
VPS13CQ709C8 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
VPS13CQ709C8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
VPS13CQ709C8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
VPS13CQ709C8 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.46□□□□□ -2.18
VPS13CQ709C8 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.46□□□□□ -2.18
VPS13CQ709C8 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.46□□□□□ -2.18
VPS13CQ709C8 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
VPS13CQ709C8 GTF2IP9-201ENST00000502460 301 ntBASIC1.46□□□□□ -2.18
VPS13CQ709C8 AC093767.1-201ENST00000504523 156 ntBASIC1.46□□□□□ -2.18
VPS13CQ709C8 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.46□□□□□ -2.18
VPS13CQ709C8 AC067805.1-201ENST00000559344 470 ntBASIC1.46□□□□□ -2.18
VPS13CQ709C8 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VPS13CQ709C8 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC1.45□□□□□ -2.18
VPS13CQ709C8 RPL23AP39-201ENST00000415533 405 ntBASIC1.45□□□□□ -2.18
VPS13CQ709C8 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.45□□□□□ -2.18
VPS13CQ709C8 NAMPTP2-201ENST00000505629 1115 ntBASIC1.45□□□□□ -2.18
VPS13CQ709C8 AL356280.1-201ENST00000603614 379 ntBASIC1.45□□□□□ -2.18
VPS13CQ709C8 AP005137.2-201ENST00000609238 400 ntBASIC1.45□□□□□ -2.18
VPS13CQ709C8 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VPS13CQ709C8 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VPS13CQ709C8 MIR548J-201ENST00000408833 112 ntBASIC1.45□□□□□ -2.18
VPS13CQ709C8 COX6CP12-201ENST00000446748 202 ntBASIC1.45□□□□□ -2.18
VPS13CQ709C8 AL590664.1-201ENST00000448065 339 ntBASIC1.45□□□□□ -2.18
VPS13CQ709C8 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS13CQ709C8 RPL23AP55-201ENST00000498163 452 ntBASIC1.45□□□□□ -2.18
VPS13CQ709C8 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.45□□□□□ -2.18
VPS13CQ709C8 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
VPS13CQ709C8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
VPS13CQ709C8 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
VPS13CQ709C8 Y_RNA.30-201ENST00000362572 97 ntBASIC1.45□□□□□ -2.18
VPS13CQ709C8 Y_RNA.36-201ENST00000362602 112 ntBASIC1.45□□□□□ -2.18
VPS13CQ709C8 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS13CQ709C8 AMD1P1-201ENST00000457220 922 ntBASIC1.45□□□□□ -2.18
VPS13CQ709C8 AC104435.1-201ENST00000483483 166 ntBASIC1.45□□□□□ -2.18
VPS13CQ709C8 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS13CQ709C8 HMGN2P47-201ENST00000559378 272 ntBASIC1.45□□□□□ -2.18
VPS13CQ709C8 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.45□□□□□ -2.18
VPS13CQ709C8 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.45□□□□□ -2.18
VPS13CQ709C8 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.45□□□□□ -2.18
VPS13CQ709C8 MTCO1P4-201ENST00000520516 1409 ntBASIC1.44□□□□□ -2.18
VPS13CQ709C8 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.44□□□□□ -2.18
VPS13CQ709C8 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
VPS13CQ709C8 RNA5SP344-201ENST00000411081 104 ntBASIC1.44□□□□□ -2.18
VPS13CQ709C8 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VPS13CQ709C8 HMGN2P19-201ENST00000425149 265 ntBASIC1.44□□□□□ -2.18
VPS13CQ709C8 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.44□□□□□ -2.18
VPS13CQ709C8 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.44□□□□□ -2.18
VPS13CQ709C8 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VPS13CQ709C8 ATP5EP1-201ENST00000510257 156 ntBASIC1.44□□□□□ -2.18
VPS13CQ709C8 AC016957.1-201ENST00000534895 309 ntBASIC1.44□□□□□ -2.18
VPS13CQ709C8 AC015720.1-201ENST00000565251 277 ntBASIC1.44□□□□□ -2.18
VPS13CQ709C8 BX649567.1-201ENST00000642071 1134 ntBASIC1.44□□□□□ -2.18
VPS13CQ709C8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.44□□□□□ -2.18
VPS13CQ709C8 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
VPS13CQ709C8 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.44□□□□□ -2.18
VPS13CQ709C8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
VPS13CQ709C8 CKAP2P1-201ENST00000555477 2049 ntBASIC1.44□□□□□ -2.18
VPS13CQ709C8 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VPS13CQ709C8 GSTA11P-201ENST00000452866 669 ntBASIC1.44□□□□□ -2.18
VPS13CQ709C8 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS13CQ709C8 SNORA31-201ENST00000362607 130 ntBASIC1.44□□□□□ -2.18
VPS13CQ709C8 RNU6-1080P-201ENST00000383982 107 ntBASIC1.44□□□□□ -2.18
VPS13CQ709C8 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS13CQ709C8 AP000705.1-201ENST00000454567 350 ntBASIC1.44□□□□□ -2.18
VPS13CQ709C8 AC104564.1-201ENST00000493028 407 ntBASIC1.44□□□□□ -2.18
VPS13CQ709C8 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.44□□□□□ -2.18
VPS13CQ709C8 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.44□□□□□ -2.18
VPS13CQ709C8 AL008729.2-201ENST00000606393 473 ntBASIC1.44□□□□□ -2.18
VPS13CQ709C8 OR10AB1P-201ENST00000609613 938 ntBASIC1.44□□□□□ -2.18
VPS13CQ709C8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
VPS13CQ709C8 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
VPS13CQ709C8 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
VPS13CQ709C8 MIR598-201ENST00000384868 97 ntBASIC1.43□□□□□ -2.18
VPS13CQ709C8 AL121972.1-201ENST00000402023 252 ntBASIC1.43□□□□□ -2.18
VPS13CQ709C8 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS13CQ709C8 Z99714.1-201ENST00000450463 807 ntBASIC1.43□□□□□ -2.18
VPS13CQ709C8 AP002748.2-201ENST00000528671 348 ntBASIC1.43□□□□□ -2.18
VPS13CQ709C8 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS13CQ709C8 AL078603.1-201ENST00000603824 313 ntBASIC1.43□□□□□ -2.18
VPS13CQ709C8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
VPS13CQ709C8 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms