Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AL845331.3-202ENST00000562856 261 ntBASIC4.78□□□□□ -1.64
KRT40Q6A162 AC025678.1-201ENST00000567861 338 ntBASIC4.78□□□□□ -1.64
KRT40Q6A162 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.78□□□□□ -1.64
KRT40Q6A162 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.78□□□□□ -1.64
KRT40Q6A162 PSMA6P4-201ENST00000603247 718 ntBASIC4.78□□□□□ -1.64
KRT40Q6A162 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.78□□□□□ -1.64
KRT40Q6A162 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRT40Q6A162 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRT40Q6A162 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.78□□□□□ -1.64
KRT40Q6A162 MIR8059-201ENST00000620427 81 ntBASIC4.78□□□□□ -1.64
KRT40Q6A162 AP003122.6-201ENST00000623831 495 ntBASIC4.78□□□□□ -1.64
KRT40Q6A162 AP003400.5-201ENST00000624827 617 ntBASIC4.78□□□□□ -1.64
KRT40Q6A162 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.78□□□□□ -1.64
KRT40Q6A162 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRT40Q6A162 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
KRT40Q6A162 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRT40Q6A162 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
KRT40Q6A162 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRT40Q6A162 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
KRT40Q6A162 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRT40Q6A162 FAM91A3P-201ENST00000456826 2544 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.77□□□□□ -1.65
KRT40Q6A162 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
KRT40Q6A162 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
KRT40Q6A162 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRT40Q6A162 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRT40Q6A162 Y_RNA.159-201ENST00000363674 87 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 RNU6-744P-201ENST00000365557 107 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 RNU6-1316P-201ENST00000384242 108 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRT40Q6A162 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 AL133384.1-201ENST00000412744 351 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 AC133104.1-201ENST00000429100 218 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.77□□□□□ -1.65
KRT40Q6A162 RPL22P17-201ENST00000438729 315 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.77□□□□□ -1.65
KRT40Q6A162 AC006011.1-201ENST00000442758 349 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 FAM103A2P-201ENST00000444122 354 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.77□□□□□ -1.65
KRT40Q6A162 PRSS3P4-201ENST00000453323 162 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 UBDP1-202ENST00000457888 382 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 VN1R105P-201ENST00000486595 910 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.77□□□□□ -1.65
KRT40Q6A162 RNA5SP154-201ENST00000516193 111 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.77□□□□□ -1.65
KRT40Q6A162 AF186190.1-201ENST00000517470 480 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 AC022616.6-201ENST00000520479 119 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.77□□□□□ -1.65
KRT40Q6A162 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
KRT40Q6A162 ZNF705CP-201ENST00000530515 889 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRT40Q6A162 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.77□□□□□ -1.65
KRT40Q6A162 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.77□□□□□ -1.65
KRT40Q6A162 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.77□□□□□ -1.65
KRT40Q6A162 AC055876.5-201ENST00000605667 259 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 AC099669.2-201ENST00000616549 437 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 CR392039.5-201ENST00000623201 510 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 AC009033.1-201ENST00000624279 431 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.77□□□□□ -1.65
KRT40Q6A162 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRT40Q6A162 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.77□□□□□ -1.65
KRT40Q6A162 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.77□□□□□ -1.65
KRT40Q6A162 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.77□□□□□ -1.65
KRT40Q6A162 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
KRT40Q6A162 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
KRT40Q6A162 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.77□□□□□ -1.65
KRT40Q6A162 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRT40Q6A162 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRT40Q6A162 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
KRT40Q6A162 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRT40Q6A162 MARK2P15-201ENST00000432204 2186 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 ZNF962P-201ENST00000443465 3140 ntBASIC4.77□□□□□ -1.65
KRT40Q6A162 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
KRT40Q6A162 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.76□□□□□ -1.65
KRT40Q6A162 AC116667.1-201ENST00000604855 2072 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
KRT40Q6A162 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRT40Q6A162 RNU6-1085P-201ENST00000363576 107 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 Y_RNA.160-201ENST00000363677 92 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 RNA5SP130-201ENST00000364431 114 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 RHOT1P2-201ENST00000366423 333 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 Y_RNA.573-201ENST00000384763 105 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 MIR93-201ENST00000385024 80 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 AL356776.1-201ENST00000406574 447 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 AC078974.1-201ENST00000411597 223 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.76□□□□□ -1.65
KRT40Q6A162 RPL21P111-201ENST00000418453 477 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.76□□□□□ -1.65
KRT40Q6A162 MTND1P11-201ENST00000456661 876 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 AC006511.1-201ENST00000470614 315 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 RPL7P49-201ENST00000471402 708 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
KRT40Q6A162 AC007182.2-201ENST00000489251 402 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 HMGN1P12-201ENST00000499125 195 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.76□□□□□ -1.65
KRT40Q6A162 RNU6-445P-201ENST00000516949 107 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 RNU6-201P-201ENST00000517100 61 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.76□□□□□ -1.65
KRT40Q6A162 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.76□□□□□ -1.65
KRT40Q6A162 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms