Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 Y_RNA.489-201ENST00000384410 101 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 U3.25-201ENST00000391209 220 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 RN7SKP159-201ENST00000410657 292 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 AL391987.1-201ENST00000441025 200 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 AP002812.1-201ENST00000495378 474 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 RPL23AP55-201ENST00000498163 452 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 RNU6-1143P-201ENST00000516125 104 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 RNU6-1332P-201ENST00000516666 104 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 SNORD116.3-201ENST00000517176 78 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 NF1P5-201ENST00000588287 448 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 AC092447.9-201ENST00000603395 144 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 AC018462.2-201ENST00000605375 395 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 AC091812.1-201ENST00000432235 1948 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 AC109780.1-201ENST00000451768 1344 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
RNF20Q5VTR2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.17□□□□□ -1.42
RNF20Q5VTR2 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.17□□□□□ -1.42
RNF20Q5VTR2 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.17□□□□□ -1.42
RNF20Q5VTR2 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RNF20Q5VTR2 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RNF20Q5VTR2 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RNF20Q5VTR2 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
RNF20Q5VTR2 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RNF20Q5VTR2 RNA5SP435-201ENST00000364044 108 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 RNU6-960P-201ENST00000364056 120 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RNF20Q5VTR2 MIR600-201ENST00000385007 98 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RNF20Q5VTR2 SNORD70.1-201ENST00000391007 85 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 MIR1182-201ENST00000408363 97 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 CHEK2P5-201ENST00000423877 246 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.17□□□□□ -1.42
RNF20Q5VTR2 CFL1P1-202ENST00000432948 411 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 AC005094.1-201ENST00000440420 368 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC6.17□□□□□ -1.42
RNF20Q5VTR2 RPL36AP13-201ENST00000457490 317 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 SNORD97-201ENST00000459187 142 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 AC103987.1-201ENST00000473394 348 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 Y_RNA.721-201ENST00000517207 102 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 IGKV2-18-201ENST00000522607 343 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 RANP3-201ENST00000530970 276 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RNF20Q5VTR2 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC6.17□□□□□ -1.42
RNF20Q5VTR2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC6.17□□□□□ -1.42
RNF20Q5VTR2 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.17□□□□□ -1.42
RNF20Q5VTR2 AC008162.1-201ENST00000604718 254 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 AL670379.4-201ENST00000605279 254 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 AC020634.1-201ENST00000608701 549 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 U2.17-201ENST00000611454 95 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 AC107871.2-201ENST00000612894 502 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
RNF20Q5VTR2 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.17□□□□□ -1.42
RNF20Q5VTR2 ADAM5-202ENST00000399789 1942 ntBASIC6.17□□□□□ -1.42
RNF20Q5VTR2 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 RNU6-432P-201ENST00000384196 109 ntBASIC6.16□□□□□ -1.42
RNF20Q5VTR2 AL035079.1-201ENST00000405210 287 ntBASIC6.16□□□□□ -1.42
RNF20Q5VTR2 RNU6-101P-201ENST00000410323 104 ntBASIC6.16□□□□□ -1.42
RNF20Q5VTR2 AC069213.2-201ENST00000420238 366 ntBASIC6.16□□□□□ -1.42
RNF20Q5VTR2 EIF4EP1-201ENST00000422311 642 ntBASIC6.16□□□□□ -1.42
RNF20Q5VTR2 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 AC092013.1-201ENST00000438795 332 ntBASIC6.16□□□□□ -1.42
RNF20Q5VTR2 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.16□□□□□ -1.42
RNF20Q5VTR2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 AC091180.1-201ENST00000462104 372 ntBASIC6.16□□□□□ -1.42
RNF20Q5VTR2 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 RN7SL101P-201ENST00000496350 279 ntBASIC6.16□□□□□ -1.42
RNF20Q5VTR2 AC135721.1-201ENST00000497954 479 ntBASIC6.16□□□□□ -1.42
RNF20Q5VTR2 AC022493.2-201ENST00000506122 481 ntBASIC6.16□□□□□ -1.42
RNF20Q5VTR2 PGAM1P13-201ENST00000507497 754 ntBASIC6.16□□□□□ -1.42
RNF20Q5VTR2 HIGD1AP14-201ENST00000507617 282 ntBASIC6.16□□□□□ -1.42
RNF20Q5VTR2 AC024940.3-201ENST00000538551 316 ntBASIC6.16□□□□□ -1.42
RNF20Q5VTR2 GNAI2P1-201ENST00000541815 315 ntBASIC6.16□□□□□ -1.42
RNF20Q5VTR2 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 MIR3941-201ENST00000582572 103 ntBASIC6.16□□□□□ -1.42
RNF20Q5VTR2 AC008521.1-201ENST00000587471 187 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms