Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RNU6-181P-201ENST00000363225 107 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 RNU6-169P-201ENST00000365336 107 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 RNU1-63P-201ENST00000383902 164 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 AL138878.1-201ENST00000405131 347 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 TXNP7-201ENST00000406296 293 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 AL603766.1-201ENST00000407763 664 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 Z98941.1-201ENST00000407764 100 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 RPL23AP25-201ENST00000430973 463 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 MTND3P21-201ENST00000433774 331 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 RPL23AP89-201ENST00000439324 255 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 FABP3P2-201ENST00000453169 399 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 SNRPGP5-201ENST00000456003 220 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 AC023194.1-201ENST00000493084 308 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 RPL23AP55-201ENST00000498163 452 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 HMGB1P29-201ENST00000505659 499 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 AC017037.1-201ENST00000508460 471 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 SNORA31.8-201ENST00000516327 108 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 RNU6-445P-201ENST00000516949 107 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 ERHP1-201ENST00000523006 310 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 MIR3934-201ENST00000579806 107 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 BPIFA4P-203ENST00000603168 689 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 RN7SL722P-201ENST00000617780 284 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 SNHG22-203ENST00000617833 660 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 RN7SL565P-201ENST00000618246 284 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 AC124864.2-201ENST00000624736 186 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 AC068137.3-201ENST00000639191 341 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 AC073869.6-201ENST00000640656 341 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 CPHL1P-201ENST00000461341 3407 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 DEFB108F-201ENST00000344638 222 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 MIR423-201ENST00000362201 94 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 SNORD56.2-201ENST00000363242 71 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 RNU6-511P-201ENST00000363496 107 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 RNU6-1284P-201ENST00000363701 100 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 RNU6-1103P-201ENST00000384150 107 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 MIR3074-201ENST00000384885 81 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 AC110754.1-201ENST00000399740 601 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 MIR1183-201ENST00000408856 89 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 C8orf59P1-201ENST00000429930 303 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 MTCO2P11-201ENST00000431069 680 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 AL138799.3-201ENST00000438968 350 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 AL662791.1-201ENST00000441992 928 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 AC007537.2-201ENST00000472093 511 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 AC007182.2-201ENST00000489251 402 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 IGLV2-34-201ENST00000490007 283 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 RNU2-58P-201ENST00000516403 183 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 IGKV2D-23-201ENST00000518179 286 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 FAM60DP-201ENST00000524174 632 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 OR4H12P-201ENST00000556269 907 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 AL606834.2-201ENST00000602954 668 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 AC090510.2-201ENST00000617465 629 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms