Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 RNF2P1-201ENST00000442955 1010 ntBASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 RPL17P49-201ENST00000443728 411 ntBASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 ELOCP23-201ENST00000452014 332 ntBASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 AC109925.1-201ENST00000478069 331 ntBASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 RNU6-583P-201ENST00000516012 92 ntBASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 AC022690.1-201ENST00000526681 550 ntBASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 RPL21P12-201ENST00000559810 515 ntBASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 AL132657.2-201ENST00000564417 358 ntBASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 MIR5680-201ENST00000577577 84 ntBASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 MAGOH2P-202ENST00000584384 429 ntBASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 BNIP3P26-201ENST00000600827 554 ntBASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 AL606834.2-201ENST00000602954 668 ntBASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 AC021749.1-201ENST00000604322 607 ntBASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 AL031176.1-201ENST00000604554 466 ntBASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 AC097504.2-201ENST00000608088 454 ntBASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 AL079343.1-201ENST00000572358 1771 ntBASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.2□□□□□ -1.9
LDLRAP1Q5SW96 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AF117829.1-206ENST00000621883 3802 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 RPL23AP57-201ENST00000332361 466 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 RNA5SP383-201ENST00000362934 120 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 RNU6-1122P-201ENST00000384449 107 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 MIR135A2-201ENST00000384854 100 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 RNA5SP80-201ENST00000410475 111 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 MTATP6P20-201ENST00000414147 562 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AC012498.1-201ENST00000424037 437 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 HSPE1P28-201ENST00000443139 211 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AC005297.2-201ENST00000450430 606 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 FCF1P6-201ENST00000456841 595 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 HMGN2P13-201ENST00000476476 274 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 RPL7P23-201ENST00000493874 747 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AC113420.1-201ENST00000507903 571 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AC022861.1-201ENST00000522981 663 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 ZNF415P1-201ENST00000582279 1166 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 VN1R78P-201ENST00000597393 564 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AC004853.1-201ENST00000604902 698 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AC016877.3-201ENST00000606778 504 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AC002076.2-201ENST00000617362 122 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AL357080.1-201ENST00000617394 239 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AC022509.4-201ENST00000621404 572 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 CUL1P1-201ENST00000509510 2425 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.19□□□□□ -1.9
LDLRAP1Q5SW96 AL079305.1-201ENST00000623159 3008 ntBASIC3.18□□□□□ -1.9
LDLRAP1Q5SW96 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
LDLRAP1Q5SW96 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.18□□□□□ -1.9
LDLRAP1Q5SW96 Y_RNA.408-201ENST00000383987 102 ntBASIC3.18□□□□□ -1.9
LDLRAP1Q5SW96 Y_RNA.472-201ENST00000384322 102 ntBASIC3.18□□□□□ -1.9
LDLRAP1Q5SW96 DHFRP6-201ENST00000401776 268 ntBASIC3.18□□□□□ -1.9
LDLRAP1Q5SW96 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LDLRAP1Q5SW96 RNU2-47P-201ENST00000410649 186 ntBASIC3.18□□□□□ -1.9
LDLRAP1Q5SW96 TPMTP2-201ENST00000414372 726 ntBASIC3.18□□□□□ -1.9
LDLRAP1Q5SW96 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.18□□□□□ -1.9
LDLRAP1Q5SW96 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.18□□□□□ -1.9
LDLRAP1Q5SW96 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.18□□□□□ -1.9
LDLRAP1Q5SW96 AC091862.1-201ENST00000438016 1100 ntBASIC3.18□□□□□ -1.9
LDLRAP1Q5SW96 ISCA1P2-201ENST00000438679 421 ntBASIC3.18□□□□□ -1.9
LDLRAP1Q5SW96 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.18□□□□□ -1.9
LDLRAP1Q5SW96 Z75741.1-201ENST00000446793 314 ntBASIC3.18□□□□□ -1.9
LDLRAP1Q5SW96 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.18□□□□□ -1.9
LDLRAP1Q5SW96 RPL36AP33-201ENST00000450395 310 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms