Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AC109347.2-201ENST00000610220 349 ntBASIC3.84□□□□□ -1.79
RUNDC3AQ59EK9 MIR486-1-201ENST00000612171 68 ntBASIC3.84□□□□□ -1.79
RUNDC3AQ59EK9 AC005332.10-201ENST00000612725 619 ntBASIC3.84□□□□□ -1.79
RUNDC3AQ59EK9 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.84□□□□□ -1.79
RUNDC3AQ59EK9 AL161637.1-201ENST00000622380 412 ntBASIC3.84□□□□□ -1.79
RUNDC3AQ59EK9 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.84□□□□□ -1.79
RUNDC3AQ59EK9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
RUNDC3AQ59EK9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RUNDC3AQ59EK9 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RUNDC3AQ59EK9 MTCO1P9-201ENST00000505577 1534 ntBASIC3.84□□□□□ -1.8
RUNDC3AQ59EK9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.84□□□□□ -1.8
RUNDC3AQ59EK9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.84□□□□□ -1.8
RUNDC3AQ59EK9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AC007685.1-201ENST00000329806 452 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 RNU4-1-201ENST00000363925 141 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 RNY4P34-201ENST00000364779 95 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 RNU6-1074P-201ENST00000383995 104 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 Y_RNA.517-201ENST00000384551 106 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 RNU6-882P-201ENST00000391025 103 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 RPS3AP36-201ENST00000398190 775 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 DNAJC19P7-201ENST00000428811 344 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 RPL21P89-201ENST00000444021 467 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AL359073.1-201ENST00000448036 403 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AC234775.1-201ENST00000454247 670 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AC110792.1-201ENST00000491826 472 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AC093278.1-201ENST00000494700 600 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 RPL29P14-201ENST00000495837 428 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 RN7SKP298-201ENST00000515950 94 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AC103783.1-201ENST00000520506 373 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AC009063.1-201ENST00000563342 702 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 COX6CP3-201ENST00000580869 223 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AL034351.1-201ENST00000605288 668 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AC121334.2-201ENST00000605387 271 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AC015540.1-201ENST00000615828 501 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AL139089.1-201ENST00000620372 975 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AC009268.2-201ENST00000621925 457 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 EXOC5P1-201ENST00000510543 1969 ntBASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.83□□□□□ -1.8
RUNDC3AQ59EK9 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AC004925.1-201ENST00000624256 2706 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 UBE3AP2-201ENST00000429033 2259 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 HSPA8P1-201ENST00000425843 1833 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 SNORD35B-201ENST00000363660 87 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 RNU5A-8P-201ENST00000364102 114 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 RNU1-132P-201ENST00000364300 164 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 RNY4P16-201ENST00000364768 94 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 RNU6-637P-201ENST00000384050 107 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 Y_RNA.505-201ENST00000384489 102 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 RPS3AP24-201ENST00000407896 734 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 RNU2-43P-201ENST00000410306 190 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 Y_RNA.625-201ENST00000411256 107 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 RNU6-195P-201ENST00000411352 109 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 RHEBP3-201ENST00000411920 351 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 MTND1P21-201ENST00000412991 285 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 C1DP2-201ENST00000418167 426 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 snoU13.24-201ENST00000458998 104 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 TMED11P-201ENST00000479478 690 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 RPS3AP50-201ENST00000487064 803 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 RPL7P24-201ENST00000493052 752 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AC138853.1-201ENST00000503549 823 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 BTF3L4P4-201ENST00000506381 449 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AC026726.1-201ENST00000512859 601 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms