Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.62□□□□□ -1.99
RFX7Q2KHR2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.62□□□□□ -1.99
RFX7Q2KHR2 AC009220.3-201ENST00000604318 586 ntBASIC2.62□□□□□ -1.99
RFX7Q2KHR2 CR589904.2-201ENST00000612533 440 ntBASIC2.62□□□□□ -1.99
RFX7Q2KHR2 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RFX7Q2KHR2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
RFX7Q2KHR2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
RFX7Q2KHR2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.62□□□□□ -1.99
RFX7Q2KHR2 RNU6-335P-201ENST00000364563 113 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 DEFB109C-201ENST00000382575 264 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 DEFB109B-201ENST00000382656 264 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 RNU2-2P-201ENST00000410396 191 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 RNU6-233P-201ENST00000410845 141 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 RNU2-25P-201ENST00000411041 191 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AC233728.2-201ENST00000425348 757 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 SUMO1P4-201ENST00000429430 302 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AC010881.1-201ENST00000433830 235 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 CKS1BP5-201ENST00000434172 273 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.61□□□□□ -1.99
RFX7Q2KHR2 RPL7P12-201ENST00000446719 750 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 OR7L1P-201ENST00000456181 380 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 HMGB1P38-201ENST00000490557 577 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AP001029.3-201ENST00000588063 596 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.61□□□□□ -1.99
RFX7Q2KHR2 U2.15-201ENST00000611544 191 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 U2.16-201ENST00000613119 191 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 U2.12-201ENST00000613778 191 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 U2.20-201ENST00000613956 192 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 U2.9-201ENST00000615427 191 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 U2.11-201ENST00000616345 191 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 U2.2-201ENST00000616535 191 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 U2.3-201ENST00000617785 191 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.61□□□□□ -1.99
RFX7Q2KHR2 U2.19-201ENST00000618602 191 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 RNU2-1-201ENST00000618664 191 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 U2.6-201ENST00000619225 191 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 U2.5-201ENST00000619465 191 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 U2.10-201ENST00000620268 191 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AP003072.5-201ENST00000623872 773 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.61□□□□□ -1.99
RFX7Q2KHR2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RFX7Q2KHR2 METTL21EP-201ENST00000298105 713 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 RNU6-1181P-201ENST00000384191 106 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
RFX7Q2KHR2 FO393413.1-201ENST00000402892 195 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 RN7SKP32-201ENST00000410167 303 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AC109780.2-201ENST00000413467 845 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AC005005.2-201ENST00000420779 380 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AL118520.1-201ENST00000450770 291 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AL513343.1-201ENST00000451818 792 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AC104435.1-201ENST00000483483 166 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AIG1P1-201ENST00000503376 148 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AC009901.1-201ENST00000506703 541 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.61□□□□□ -1.99
RFX7Q2KHR2 SNORA31.15-201ENST00000516771 132 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 RPL23AP78-201ENST00000599928 470 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 DUXAP3-201ENST00000603616 594 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AC009318.2-201ENST00000610917 651 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AC007275.1-201ENST00000621243 671 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AC110994.2-201ENST00000635481 492 ntBASIC2.61□□□□□ -1.99
RFX7Q2KHR2 AC244517.1-201ENST00000606030 2086 ntBASIC2.6□□□□□ -1.99
RFX7Q2KHR2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.6□□□□□ -1.99
RFX7Q2KHR2 ZNF720P1-201ENST00000562403 1939 ntBASIC2.6□□□□□ -1.99
RFX7Q2KHR2 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.6□□□□□ -1.99
RFX7Q2KHR2 AC012321.1-201ENST00000561622 1588 ntBASIC2.6□□□□□ -1.99
RFX7Q2KHR2 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
RFX7Q2KHR2 DNAJC19P6-201ENST00000401853 280 ntBASIC2.6□□□□□ -1.99
RFX7Q2KHR2 GSTA9P-201ENST00000406231 611 ntBASIC2.6□□□□□ -1.99
RFX7Q2KHR2 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.6□□□□□ -1.99
RFX7Q2KHR2 BX682237.1-201ENST00000415016 335 ntBASIC2.6□□□□□ -1.99
RFX7Q2KHR2 MTND4P11-201ENST00000417020 1058 ntBASIC2.6□□□□□ -1.99
RFX7Q2KHR2 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.6□□□□□ -1.99
RFX7Q2KHR2 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.6□□□□□ -1.99
RFX7Q2KHR2 RNU6-1073P-201ENST00000517182 106 ntBASIC2.6□□□□□ -1.99
RFX7Q2KHR2 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.6□□□□□ -1.99
RFX7Q2KHR2 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.6□□□□□ -1.99
RFX7Q2KHR2 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.6□□□□□ -1.99
RFX7Q2KHR2 MIR5002-201ENST00000584713 97 ntBASIC2.6□□□□□ -1.99
RFX7Q2KHR2 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.6□□□□□ -1.99
RFX7Q2KHR2 AL391834.1-201ENST00000609609 560 ntBASIC2.6□□□□□ -1.99
RFX7Q2KHR2 AC103710.1-201ENST00000610003 901 ntBASIC2.6□□□□□ -1.99
RFX7Q2KHR2 AL353997.5-201ENST00000618886 171 ntBASIC2.6□□□□□ -1.99
RFX7Q2KHR2 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.6□□□□□ -1.99
RFX7Q2KHR2 AC091564.4-201ENST00000533934 2194 ntBASIC2.59□□□□□ -1.99
RFX7Q2KHR2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RFX7Q2KHR2 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RFX7Q2KHR2 ZNF72P-201ENST00000425869 1908 ntBASIC2.59□□□□□ -1.99
RFX7Q2KHR2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
RFX7Q2KHR2 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
RFX7Q2KHR2 RNU6-799P-201ENST00000363567 107 ntBASIC2.59□□□□□ -2
RFX7Q2KHR2 Y_RNA.238-201ENST00000364441 102 ntBASIC2.59□□□□□ -2
RFX7Q2KHR2 RNA5SP88-201ENST00000365560 109 ntBASIC2.59□□□□□ -2
RFX7Q2KHR2 RNU6-76P-201ENST00000384060 104 ntBASIC2.59□□□□□ -2
RFX7Q2KHR2 ATP5F1P6-201ENST00000402768 767 ntBASIC2.59□□□□□ -2
RFX7Q2KHR2 FNDC3CP-201ENST00000420795 1155 ntBASIC2.59□□□□□ -2
RFX7Q2KHR2 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms