Protein–RNA interactions for Protein: Q05209

PTPN12, Tyrosine-protein phosphatase non-receptor type 12, humanhuman

Known RBP Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12Q05209 RPS29P15-201ENST00000458329 171 ntBASIC5.7□□□□□ -1.5
PTPN12Q05209 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.7□□□□□ -1.5
PTPN12Q05209 HMGB1P21-201ENST00000502313 581 ntBASIC5.7□□□□□ -1.5
PTPN12Q05209 HMGB3P16-201ENST00000508037 287 ntBASIC5.7□□□□□ -1.5
PTPN12Q05209 AC011979.2-201ENST00000527568 352 ntBASIC5.7□□□□□ -1.5
PTPN12Q05209 PTP4A1P6-201ENST00000531034 478 ntBASIC5.7□□□□□ -1.5
PTPN12Q05209 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.7□□□□□ -1.5
PTPN12Q05209 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.7□□□□□ -1.5
PTPN12Q05209 AC015912.2-201ENST00000571053 181 ntBASIC5.7□□□□□ -1.5
PTPN12Q05209 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.7□□□□□ -1.5
PTPN12Q05209 AC021646.1-201ENST00000605469 484 ntBASIC5.7□□□□□ -1.5
PTPN12Q05209 AL121992.2-201ENST00000606262 256 ntBASIC5.7□□□□□ -1.5
PTPN12Q05209 AL590099.1-201ENST00000615276 138 ntBASIC5.7□□□□□ -1.5
PTPN12Q05209 AC084781.2-201ENST00000615568 161 ntBASIC5.7□□□□□ -1.5
PTPN12Q05209 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.7□□□□□ -1.5
PTPN12Q05209 AL133216.2-202ENST00000634512 349 ntBASIC5.7□□□□□ -1.5
PTPN12Q05209 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN12Q05209 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN12Q05209 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.7□□□□□ -1.5
PTPN12Q05209 OR56B2P-202ENST00000641377 2453 ntBASIC5.7□□□□□ -1.5
PTPN12Q05209 IQCB2P-201ENST00000401788 1633 ntBASIC5.7□□□□□ -1.5
PTPN12Q05209 AL391684.1-202ENST00000641293 1636 ntBASIC5.7□□□□□ -1.5
PTPN12Q05209 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN12Q05209 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.69□□□□□ -1.5
PTPN12Q05209 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PTPN12Q05209 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN12Q05209 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN12Q05209 AC009902.3-201ENST00000606235 2172 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN12Q05209 RAD17P1-201ENST00000418130 2042 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PTPN12Q05209 Y_RNA.100-201ENST00000363141 102 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 RN7SKP186-201ENST00000365371 303 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 Y_RNA.422-201ENST00000384054 114 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 MT-TC-201ENST00000387405 66 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 AL592291.1-201ENST00000403830 352 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 AL606923.1-201ENST00000406616 190 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 RNU6-193P-201ENST00000410977 107 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 HMGN1P24-201ENST00000412282 298 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.69□□□□□ -1.5
PTPN12Q05209 BEND7P1-201ENST00000422058 457 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.69□□□□□ -1.5
PTPN12Q05209 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.69□□□□□ -1.5
PTPN12Q05209 Z95327.1-201ENST00000446082 482 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 AC027575.1-201ENST00000481064 460 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 AC005798.1-201ENST00000513715 387 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.69□□□□□ -1.5
PTPN12Q05209 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.69□□□□□ -1.5
PTPN12Q05209 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.69□□□□□ -1.5
PTPN12Q05209 AC069061.3-201ENST00000582254 823 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.69□□□□□ -1.5
PTPN12Q05209 AC113194.1-201ENST00000606037 500 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 AL355802.3-201ENST00000607571 545 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 AC004908.2-201ENST00000609090 574 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 AL031666.3-201ENST00000609320 1006 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 MTND4LP32-201ENST00000636111 270 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN12Q05209 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN12Q05209 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN12Q05209 AC005005.4-201ENST00000623789 16698 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN12Q05209 AL359922.3-201ENST00000624779 1670 ntBASIC5.69□□□□□ -1.5
PTPN12Q05209 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.69□□□□□ -1.5
PTPN12Q05209 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN12Q05209 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN12Q05209 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN12Q05209 AP001284.1-201ENST00000528393 2118 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN12Q05209 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN12Q05209 Y_RNA.202-201ENST00000364083 110 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 RNU5A-8P-201ENST00000364102 114 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 SNORA62.1-201ENST00000364287 154 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 RNA5SP509-201ENST00000364577 119 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 RNU4-20P-201ENST00000365601 151 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 RNU6-641P-201ENST00000384006 107 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 RNU6-1297P-201ENST00000384415 104 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 MIR23B-201ENST00000384832 97 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 RNU6-278P-201ENST00000390945 109 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN12Q05209 AL080315.1-201ENST00000406055 466 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 OR2AH1P-201ENST00000425717 928 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 FTH1P1-201ENST00000437933 532 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 GTF2IP13-201ENST00000438487 386 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 AL162591.2-201ENST00000449634 317 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN12Q05209 ST13P14-201ENST00000474095 734 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 AC087385.1-201ENST00000475062 312 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 AC023424.1-201ENST00000496058 459 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN12Q05209 RPL7P20-201ENST00000520308 745 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 OR5BN1P-201ENST00000532955 829 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 AC006116.10-201ENST00000591836 581 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 AC080078.3-201ENST00000605407 463 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN12Q05209 uc_338.15-201ENST00000615470 191 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 AC244100.1-202ENST00000621554 382 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
PTPN12Q05209 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
PTPN12Q05209 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms