Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.19□□□□□ -2.22
HSPG2P98160 DEFA7P-201ENST00000382676 285 ntBASIC1.19□□□□□ -2.22
HSPG2P98160 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.19□□□□□ -2.22
HSPG2P98160 AL513321.1-201ENST00000441175 761 ntBASIC1.19□□□□□ -2.22
HSPG2P98160 HSPE1P28-201ENST00000443139 211 ntBASIC1.19□□□□□ -2.22
HSPG2P98160 AC022634.1-201ENST00000520765 532 ntBASIC1.19□□□□□ -2.22
HSPG2P98160 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.19□□□□□ -2.22
HSPG2P98160 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.19□□□□□ -2.22
HSPG2P98160 MTND5P3-201ENST00000438536 1800 ntBASIC1.19□□□□□ -2.22
HSPG2P98160 MTCO1P4-201ENST00000520516 1409 ntBASIC1.19□□□□□ -2.22
HSPG2P98160 HMGB1P11-201ENST00000413899 637 ntBASIC1.19□□□□□ -2.22
HSPG2P98160 MTND4LP16-201ENST00000440828 295 ntBASIC1.19□□□□□ -2.22
HSPG2P98160 AC007536.1-201ENST00000533382 349 ntBASIC1.19□□□□□ -2.22
HSPG2P98160 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.19□□□□□ -2.22
HSPG2P98160 MTCO3P13-201ENST00000577757 781 ntBASIC1.19□□□□□ -2.22
HSPG2P98160 AC073387.2-201ENST00000604797 784 ntBASIC1.19□□□□□ -2.22
HSPG2P98160 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC1.19□□□□□ -2.22
HSPG2P98160 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
HSPG2P98160 OR5H15-201ENST00000383696 930 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.18□□□□□ -2.22
HSPG2P98160 NDUFB4P5-201ENST00000415445 361 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 AC107015.1-201ENST00000466902 747 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 AC068790.3-201ENST00000602988 553 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.18□□□□□ -2.22
HSPG2P98160 HMGN2P28-201ENST00000606102 262 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 MIR6715B-201ENST00000637172 77 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 LRRC77P-213ENST00000637727 880 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HSPG2P98160 RNU1-51P-201ENST00000365345 176 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 MIR625-201ENST00000385047 85 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 RPS6P12-201ENST00000432491 726 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 SDR42E1P3-201ENST00000438345 502 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.18□□□□□ -2.22
HSPG2P98160 snoU109.4-201ENST00000458953 143 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 NAMPTP2-201ENST00000505629 1115 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 AC117532.1-201ENST00000514638 323 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 AL512598.1-201ENST00000610158 273 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.18□□□□□ -2.22
HSPG2P98160 AC244517.12-201ENST00000623581 663 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.18□□□□□ -2.22
HSPG2P98160 DYNLT3P1-201ENST00000378574 347 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 MIR1294-201ENST00000408503 142 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 SNORA79B-201ENST00000410557 148 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 AL445213.1-201ENST00000412589 747 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 AC108734.3-201ENST00000481241 1165 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC1.18□□□□□ -2.22
HSPG2P98160 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.18□□□□□ -2.22
HSPG2P98160 AC005730.3-201ENST00000583067 366 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.18□□□□□ -2.22
HSPG2P98160 AC092326.2-201ENST00000624772 1561 ntBASIC1.18□□□□□ -2.22
HSPG2P98160 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.17□□□□□ -2.22
HSPG2P98160 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HSPG2P98160 CDC42P1-201ENST00000456658 548 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 AC006390.1-201ENST00000508068 283 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.17□□□□□ -2.22
HSPG2P98160 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC1.17□□□□□ -2.22
HSPG2P98160 AL161670.1-201ENST00000554348 137 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.17□□□□□ -2.22
HSPG2P98160 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.17□□□□□ -2.22
HSPG2P98160 AL645939.4-201ENST00000604495 135 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.17□□□□□ -2.22
HSPG2P98160 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HSPG2P98160 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.17□□□□□ -2.22
HSPG2P98160 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HSPG2P98160 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.17□□□□□ -2.22
HSPG2P98160 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC1.17□□□□□ -2.22
HSPG2P98160 AL445685.2-201ENST00000422551 342 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 HMGN1P33-201ENST00000432945 451 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.17□□□□□ -2.22
HSPG2P98160 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
HSPG2P98160 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.17□□□□□ -2.22
HSPG2P98160 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.17□□□□□ -2.22
HSPG2P98160 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.17□□□□□ -2.22
HSPG2P98160 AL356280.1-201ENST00000603614 379 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 AC105429.2-201ENST00000610567 517 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 AP001005.3-201ENST00000622049 129 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 RPL23AP61-201ENST00000623642 466 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 AP002967.1-201ENST00000624203 539 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 AC010329.2-201ENST00000595195 2737 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HSPG2P98160 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.17□□□□□ -2.22
HSPG2P98160 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.17□□□□□ -2.22
HSPG2P98160 SNORA67.5-201ENST00000391036 107 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 MTND6P18-201ENST00000439477 513 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 USP9YP15-201ENST00000442391 422 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 HMGB3P15-201ENST00000507326 574 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.17□□□□□ -2.22
HSPG2P98160 AC025281.1-201ENST00000567026 265 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.17□□□□□ -2.22
HSPG2P98160 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.17□□□□□ -2.22
HSPG2P98160 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HSPG2P98160 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HSPG2P98160 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.17□□□□□ -2.22
HSPG2P98160 RNU6-984P-201ENST00000363236 109 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 SNORA51.4-201ENST00000364993 124 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 GSTA12P-201ENST00000402398 508 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 AL591704.1-201ENST00000432574 275 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 AL357520.1-201ENST00000441557 453 ntBASIC1.17□□□□□ -2.22
HSPG2P98160 SSXP1-201ENST00000453640 473 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms