Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCNA1P78396 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCNA1P78396 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCNA1P78396 AL024474.1-201ENST00000404655 591 ntBASIC3.22□□□□□ -1.89
CCNA1P78396 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.22□□□□□ -1.89
CCNA1P78396 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CCNA1P78396 AC004866.2-201ENST00000438285 481 ntBASIC3.22□□□□□ -1.89
CCNA1P78396 AC112653.1-201ENST00000443851 386 ntBASIC3.22□□□□□ -1.89
CCNA1P78396 RPL7P36-201ENST00000444633 681 ntBASIC3.22□□□□□ -1.89
CCNA1P78396 RPS29P12-201ENST00000460178 152 ntBASIC3.22□□□□□ -1.89
CCNA1P78396 RPS17P11-201ENST00000474297 293 ntBASIC3.22□□□□□ -1.89
CCNA1P78396 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.22□□□□□ -1.89
CCNA1P78396 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.22□□□□□ -1.89
CCNA1P78396 RNU4-29P-201ENST00000515943 174 ntBASIC3.22□□□□□ -1.89
CCNA1P78396 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.22□□□□□ -1.89
CCNA1P78396 AC011611.5-201ENST00000552477 578 ntBASIC3.22□□□□□ -1.89
CCNA1P78396 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCNA1P78396 AL020997.3-201ENST00000602843 359 ntBASIC3.22□□□□□ -1.89
CCNA1P78396 AC136601.2-201ENST00000604356 474 ntBASIC3.22□□□□□ -1.89
CCNA1P78396 AC012467.1-201ENST00000607740 256 ntBASIC3.22□□□□□ -1.89
CCNA1P78396 AC008083.4-201ENST00000615076 444 ntBASIC3.22□□□□□ -1.89
CCNA1P78396 AC007275.1-201ENST00000621243 671 ntBASIC3.22□□□□□ -1.89
CCNA1P78396 AC092608.2-201ENST00000624427 218 ntBASIC3.22□□□□□ -1.89
CCNA1P78396 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCNA1P78396 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCNA1P78396 GDI2P1-201ENST00000429312 1336 ntBASIC3.21□□□□□ -1.89
CCNA1P78396 AL513185.3-201ENST00000433335 1300 ntBASIC3.21□□□□□ -1.89
CCNA1P78396 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.21□□□□□ -1.9
CCNA1P78396 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CCNA1P78396 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCNA1P78396 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCNA1P78396 RNU6-619P-201ENST00000365146 108 ntBASIC3.21□□□□□ -1.9
CCNA1P78396 MTCO2P31-201ENST00000402702 684 ntBASIC3.21□□□□□ -1.9
CCNA1P78396 RPL27AP8-201ENST00000424277 446 ntBASIC3.21□□□□□ -1.9
CCNA1P78396 AC079780.1-201ENST00000428259 207 ntBASIC3.21□□□□□ -1.9
CCNA1P78396 AC104332.2-201ENST00000429959 156 ntBASIC3.21□□□□□ -1.9
CCNA1P78396 HSFY3P-201ENST00000444242 1191 ntBASIC3.21□□□□□ -1.9
CCNA1P78396 AP000936.2-201ENST00000447151 681 ntBASIC3.21□□□□□ -1.9
CCNA1P78396 GTF2IP12-201ENST00000456547 356 ntBASIC3.21□□□□□ -1.9
CCNA1P78396 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.21□□□□□ -1.9
CCNA1P78396 SNORA31.21-201ENST00000517180 77 ntBASIC3.21□□□□□ -1.9
CCNA1P78396 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCNA1P78396 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.21□□□□□ -1.9
CCNA1P78396 AP002770.2-201ENST00000543613 532 ntBASIC3.21□□□□□ -1.9
CCNA1P78396 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.21□□□□□ -1.9
CCNA1P78396 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.21□□□□□ -1.9
CCNA1P78396 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.21□□□□□ -1.9
CCNA1P78396 LINC00557-201ENST00000563184 1279 ntBASIC3.21□□□□□ -1.9
CCNA1P78396 SNORD39.3-201ENST00000584451 71 ntBASIC3.21□□□□□ -1.9
CCNA1P78396 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.21□□□□□ -1.9
CCNA1P78396 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.21□□□□□ -1.9
CCNA1P78396 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCNA1P78396 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCNA1P78396 AC099654.7-201ENST00000635788 2127 ntBASIC3.2□□□□□ -1.9
CCNA1P78396 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCNA1P78396 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCNA1P78396 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
CCNA1P78396 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CCNA1P78396 RNU6-650P-201ENST00000365658 111 ntBASIC3.2□□□□□ -1.9
CCNA1P78396 DYNLT3P1-201ENST00000378574 347 ntBASIC3.2□□□□□ -1.9
CCNA1P78396 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.2□□□□□ -1.9
CCNA1P78396 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.2□□□□□ -1.9
CCNA1P78396 MTCO1P39-201ENST00000426148 480 ntBASIC3.2□□□□□ -1.9
CCNA1P78396 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.2□□□□□ -1.9
CCNA1P78396 OR2B8P-201ENST00000432841 938 ntBASIC3.2□□□□□ -1.9
CCNA1P78396 FTH1P1-201ENST00000437933 532 ntBASIC3.2□□□□□ -1.9
CCNA1P78396 AL513328.1-201ENST00000446460 224 ntBASIC3.2□□□□□ -1.9
CCNA1P78396 OR6K5P-201ENST00000447050 945 ntBASIC3.2□□□□□ -1.9
CCNA1P78396 AL589880.1-201ENST00000448271 287 ntBASIC3.2□□□□□ -1.9
CCNA1P78396 AC008481.1-201ENST00000463278 396 ntBASIC3.2□□□□□ -1.9
CCNA1P78396 AC108860.1-201ENST00000484521 383 ntBASIC3.2□□□□□ -1.9
CCNA1P78396 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.2□□□□□ -1.9
CCNA1P78396 ARL4AP2-201ENST00000507378 601 ntBASIC3.2□□□□□ -1.9
CCNA1P78396 RNU6-1095P-201ENST00000516148 108 ntBASIC3.2□□□□□ -1.9
CCNA1P78396 AC068657.1-201ENST00000520807 306 ntBASIC3.2□□□□□ -1.9
CCNA1P78396 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.2□□□□□ -1.9
CCNA1P78396 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.2□□□□□ -1.9
CCNA1P78396 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.2□□□□□ -1.9
CCNA1P78396 MED28P6-201ENST00000558776 231 ntBASIC3.2□□□□□ -1.9
CCNA1P78396 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.2□□□□□ -1.9
CCNA1P78396 RPL23AP78-201ENST00000599928 470 ntBASIC3.2□□□□□ -1.9
CCNA1P78396 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.2□□□□□ -1.9
CCNA1P78396 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.2□□□□□ -1.9
CCNA1P78396 AC009039.2-201ENST00000624524 529 ntBASIC3.2□□□□□ -1.9
CCNA1P78396 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.2□□□□□ -1.9
CCNA1P78396 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CCNA1P78396 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCNA1P78396 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CCNA1P78396 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCNA1P78396 MTND5P27-201ENST00000428871 1720 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCNA1P78396 MIR148B-201ENST00000362252 99 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 RNU1-112P-201ENST00000364401 164 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCNA1P78396 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.19□□□□□ -1.9
CCNA1P78396 U3.29-201ENST00000391296 212 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 UBE2V1P15-201ENST00000407776 448 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 RN7SKP58-201ENST00000411010 305 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 AC245054.2-201ENST00000415639 319 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 AC012498.1-201ENST00000424037 437 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms