Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 MTCYBP17-201ENST00000503579 789 ntBASIC3.3□□□□□ -1.88
SRP54P61011 DSTNP2-201ENST00000504533 515 ntBASIC3.3□□□□□ -1.88
SRP54P61011 AC110794.1-201ENST00000505816 425 ntBASIC3.3□□□□□ -1.88
SRP54P61011 POU5F1P7-201ENST00000508759 541 ntBASIC3.3□□□□□ -1.88
SRP54P61011 AC010374.2-201ENST00000512933 535 ntBASIC3.3□□□□□ -1.88
SRP54P61011 AC006499.2-201ENST00000513470 337 ntBASIC3.3□□□□□ -1.88
SRP54P61011 NDUFB9P3-201ENST00000521269 501 ntBASIC3.3□□□□□ -1.88
SRP54P61011 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
SRP54P61011 MED28P6-201ENST00000558776 231 ntBASIC3.3□□□□□ -1.88
SRP54P61011 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.3□□□□□ -1.88
SRP54P61011 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.3□□□□□ -1.88
SRP54P61011 MIR5680-201ENST00000577577 84 ntBASIC3.3□□□□□ -1.88
SRP54P61011 ZNF415P1-201ENST00000582279 1166 ntBASIC3.3□□□□□ -1.88
SRP54P61011 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.3□□□□□ -1.88
SRP54P61011 CKS1BP3-201ENST00000600888 237 ntBASIC3.3□□□□□ -1.88
SRP54P61011 AC091057.3-201ENST00000602684 733 ntBASIC3.3□□□□□ -1.88
SRP54P61011 AL160237.3-201ENST00000604114 1013 ntBASIC3.3□□□□□ -1.88
SRP54P61011 AL022099.1-201ENST00000604551 712 ntBASIC3.3□□□□□ -1.88
SRP54P61011 AL133445.2-201ENST00000611191 527 ntBASIC3.3□□□□□ -1.88
SRP54P61011 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.3□□□□□ -1.88
SRP54P61011 CRYM-AS1-204ENST00000637983 556 ntBASIC3.3□□□□□ -1.88
SRP54P61011 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SRP54P61011 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SRP54P61011 TAB3P1-202ENST00000452645 1634 ntBASIC3.3□□□□□ -1.88
SRP54P61011 AC005539.1-201ENST00000443768 1479 ntBASIC3.29□□□□□ -1.88
SRP54P61011 AL390862.1-201ENST00000635467 1469 ntBASIC3.29□□□□□ -1.88
SRP54P61011 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.29□□□□□ -1.88
SRP54P61011 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SRP54P61011 RPL23AP57-201ENST00000332361 466 ntBASIC3.29□□□□□ -1.88
SRP54P61011 AC109780.2-201ENST00000413467 845 ntBASIC3.29□□□□□ -1.88
SRP54P61011 AL592310.1-201ENST00000414330 671 ntBASIC3.29□□□□□ -1.88
SRP54P61011 AL356320.2-201ENST00000417263 507 ntBASIC3.29□□□□□ -1.88
SRP54P61011 TIMM9P2-201ENST00000419324 266 ntBASIC3.29□□□□□ -1.88
SRP54P61011 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.29□□□□□ -1.88
SRP54P61011 BEND7P1-201ENST00000422058 457 ntBASIC3.29□□□□□ -1.88
SRP54P61011 UBE2D3P2-201ENST00000424409 445 ntBASIC3.29□□□□□ -1.88
SRP54P61011 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.29□□□□□ -1.88
SRP54P61011 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.29□□□□□ -1.88
SRP54P61011 RPL23AP22-201ENST00000437556 453 ntBASIC3.29□□□□□ -1.88
SRP54P61011 AL645638.1-201ENST00000440519 361 ntBASIC3.29□□□□□ -1.88
SRP54P61011 CYCSP32-201ENST00000440548 321 ntBASIC3.29□□□□□ -1.88
SRP54P61011 OR10R1P-201ENST00000441524 1141 ntBASIC3.29□□□□□ -1.88
SRP54P61011 AL353691.1-201ENST00000451332 387 ntBASIC3.29□□□□□ -1.88
SRP54P61011 RPL23AP67-201ENST00000465341 474 ntBASIC3.29□□□□□ -1.88
SRP54P61011 RN7SL442P-201ENST00000473804 320 ntBASIC3.29□□□□□ -1.88
SRP54P61011 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.29□□□□□ -1.88
SRP54P61011 XKRY-201ENST00000510392 1100 ntBASIC3.29□□□□□ -1.88
SRP54P61011 AP005205.1-201ENST00000563503 508 ntBASIC3.29□□□□□ -1.88
SRP54P61011 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SRP54P61011 MIR4509-3-201ENST00000578671 94 ntBASIC3.29□□□□□ -1.88
SRP54P61011 OR4K7P-201ENST00000580232 945 ntBASIC3.29□□□□□ -1.88
SRP54P61011 COX6CP3-201ENST00000580869 223 ntBASIC3.29□□□□□ -1.88
SRP54P61011 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.29□□□□□ -1.88
SRP54P61011 MIR4509-2-201ENST00000583920 94 ntBASIC3.29□□□□□ -1.88
SRP54P61011 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.29□□□□□ -1.88
SRP54P61011 VN1R78P-201ENST00000597393 564 ntBASIC3.29□□□□□ -1.88
SRP54P61011 AC004987.4-201ENST00000603383 338 ntBASIC3.29□□□□□ -1.88
SRP54P61011 DUXAP11-201ENST00000603858 526 ntBASIC3.29□□□□□ -1.88
SRP54P61011 AC004853.1-201ENST00000604902 698 ntBASIC3.29□□□□□ -1.88
SRP54P61011 AL136370.1-201ENST00000608166 691 ntBASIC3.29□□□□□ -1.88
SRP54P61011 MIR4509-1-201ENST00000618224 94 ntBASIC3.29□□□□□ -1.88
SRP54P61011 AC090740.1-201ENST00000623193 2262 ntBASIC3.29□□□□□ -1.88
SRP54P61011 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.29□□□□□ -1.88
SRP54P61011 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SRP54P61011 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SRP54P61011 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SRP54P61011 AL513185.3-201ENST00000433335 1300 ntBASIC3.28□□□□□ -1.88
SRP54P61011 RNU1-75P-201ENST00000347264 129 ntBASIC3.28□□□□□ -1.88
SRP54P61011 RNU6-621P-201ENST00000364752 109 ntBASIC3.28□□□□□ -1.88
SRP54P61011 RPL17P50-201ENST00000396131 546 ntBASIC3.28□□□□□ -1.88
SRP54P61011 RNU4-22P-201ENST00000411058 166 ntBASIC3.28□□□□□ -1.88
SRP54P61011 RNU6-55P-201ENST00000411092 107 ntBASIC3.28□□□□□ -1.88
SRP54P61011 RNU6-954P-201ENST00000411355 107 ntBASIC3.28□□□□□ -1.88
SRP54P61011 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.28□□□□□ -1.88
SRP54P61011 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.28□□□□□ -1.88
SRP54P61011 AC233728.2-201ENST00000425348 757 ntBASIC3.28□□□□□ -1.88
SRP54P61011 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.28□□□□□ -1.88
SRP54P61011 AL353705.1-201ENST00000433468 480 ntBASIC3.28□□□□□ -1.88
SRP54P61011 AC009969.1-201ENST00000438726 172 ntBASIC3.28□□□□□ -1.88
SRP54P61011 SDCBPP1-201ENST00000440192 890 ntBASIC3.28□□□□□ -1.88
SRP54P61011 RPL17P49-201ENST00000443728 411 ntBASIC3.28□□□□□ -1.88
SRP54P61011 AC008264.1-201ENST00000447612 367 ntBASIC3.28□□□□□ -1.88
SRP54P61011 ZNF886P-201ENST00000450781 723 ntBASIC3.28□□□□□ -1.88
SRP54P61011 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.28□□□□□ -1.88
SRP54P61011 AC108860.1-201ENST00000484521 383 ntBASIC3.28□□□□□ -1.88
SRP54P61011 AC006483.1-201ENST00000487308 313 ntBASIC3.28□□□□□ -1.88
SRP54P61011 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.28□□□□□ -1.88
SRP54P61011 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SRP54P61011 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.28□□□□□ -1.88
SRP54P61011 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SRP54P61011 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.28□□□□□ -1.88
SRP54P61011 AC004832.5-201ENST00000608677 401 ntBASIC3.28□□□□□ -1.88
SRP54P61011 TUG1_1.1-201ENST00000610654 145 ntBASIC3.28□□□□□ -1.88
SRP54P61011 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.28□□□□□ -1.88
SRP54P61011 AC109809.1-201ENST00000619665 545 ntBASIC3.28□□□□□ -1.88
SRP54P61011 MIR8057-201ENST00000620957 69 ntBASIC3.28□□□□□ -1.88
SRP54P61011 AL356321.1-201ENST00000621360 228 ntBASIC3.28□□□□□ -1.88
SRP54P61011 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SRP54P61011 CR383658.2-201ENST00000547576 1525 ntBASIC3.28□□□□□ -1.88
SRP54P61011 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms