Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC007537.2-201ENST00000472093 511 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.18□□□□□ -1.74
CLRN1P58418 RPS15AP36-201ENST00000492022 382 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 AC103851.1-201ENST00000506833 274 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.18□□□□□ -1.74
CLRN1P58418 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.18□□□□□ -1.74
CLRN1P58418 RNU6-1314P-201ENST00000517139 104 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 NARSP2-201ENST00000518524 679 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.18□□□□□ -1.74
CLRN1P58418 AP005435.4-201ENST00000529514 284 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.18□□□□□ -1.74
CLRN1P58418 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLRN1P58418 AC087241.2-201ENST00000535801 324 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.18□□□□□ -1.74
CLRN1P58418 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.18□□□□□ -1.74
CLRN1P58418 BNIP3P6-201ENST00000549284 499 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.18□□□□□ -1.74
CLRN1P58418 AL390726.5-202ENST00000564800 256 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.18□□□□□ -1.74
CLRN1P58418 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.18□□□□□ -1.74
CLRN1P58418 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.18□□□□□ -1.74
CLRN1P58418 MIR3934-201ENST00000579806 107 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 AC233702.9-201ENST00000581528 203 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.18□□□□□ -1.74
CLRN1P58418 AL391358.1-201ENST00000605342 190 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 RNU6-89P-201ENST00000606519 100 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 AL442067.2-201ENST00000614033 363 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 AL603758.1-201ENST00000618654 241 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 AC087385.3-201ENST00000620477 187 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLRN1P58418 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLRN1P58418 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
CLRN1P58418 SDAD1P1-202ENST00000524156 2051 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 AC244517.1-201ENST00000606030 2086 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CLRN1P58418 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CLRN1P58418 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.18□□□□□ -1.74
CLRN1P58418 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLRN1P58418 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLRN1P58418 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLRN1P58418 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLRN1P58418 AC010300.1-201ENST00000600671 5134 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.17□□□□□ -1.74
CLRN1P58418 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.17□□□□□ -1.74
CLRN1P58418 RNU6-552P-201ENST00000362869 119 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 RNU6-188P-201ENST00000364207 107 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 RNU5E-6P-201ENST00000365574 115 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
CLRN1P58418 RNU6-1029P-201ENST00000384109 107 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 MIR514A2-201ENST00000385131 88 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 MIR514A3-201ENST00000385132 88 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 RNU6-510P-201ENST00000391239 108 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 RNU6-903P-201ENST00000391270 109 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 AL109755.1-201ENST00000401791 649 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 FAT1P1-201ENST00000406588 507 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.17□□□□□ -1.74
CLRN1P58418 RN7SKP267-201ENST00000410381 285 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 RNA5SP113-201ENST00000410486 84 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 AL645608.4-201ENST00000423619 154 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 ERLEC1P1-201ENST00000433806 578 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 AL359265.2-201ENST00000434367 631 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 TDGF1P1-201ENST00000445734 527 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 AL590399.6-201ENST00000446396 307 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 CEACAMP6-201ENST00000452007 574 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 NIP7P2-201ENST00000485801 544 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.17□□□□□ -1.74
CLRN1P58418 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.17□□□□□ -1.74
CLRN1P58418 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.17□□□□□ -1.74
CLRN1P58418 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.17□□□□□ -1.74
CLRN1P58418 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.17□□□□□ -1.74
CLRN1P58418 RN7SKP276-201ENST00000516242 268 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 Y_RNA.701-201ENST00000516812 110 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.17□□□□□ -1.74
CLRN1P58418 HMGN1P28-201ENST00000521340 364 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 AP001922.4-201ENST00000526967 290 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 HPRT1P3-201ENST00000539521 576 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.17□□□□□ -1.74
CLRN1P58418 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.17□□□□□ -1.74
CLRN1P58418 AC011611.1-201ENST00000552179 197 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 AC068446.3-201ENST00000555285 382 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.17□□□□□ -1.74
CLRN1P58418 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.17□□□□□ -1.74
CLRN1P58418 RNF138P2-201ENST00000603490 592 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 AC133644.2-201ENST00000608142 540 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 uc_338.5-201ENST00000611839 155 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 RMST_7.1-201ENST00000621935 268 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 MIR6719-201ENST00000622428 87 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 AP001642.1-201ENST00000624727 2117 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.17□□□□□ -1.74
CLRN1P58418 TPTEP1-208ENST00000636884 213 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CLRN1P58418 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLRN1P58418 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLRN1P58418 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLRN1P58418 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
CLRN1P58418 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLRN1P58418 ASNSP1-201ENST00000518311 1939 ntBASIC4.17□□□□□ -1.74
CLRN1P58418 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.16□□□□□ -1.74
CLRN1P58418 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms