Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AP000790.1-201ENST00000528891 737 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGCS2P54868 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.33□□□□□ -1.88
HMGCS2P54868 MTCYBP28-201ENST00000566728 1132 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 MIR3945-201ENST00000581853 98 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 AP001269.3-201ENST00000588718 329 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.33□□□□□ -1.88
HMGCS2P54868 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.33□□□□□ -1.88
HMGCS2P54868 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.33□□□□□ -1.88
HMGCS2P54868 U7.8-201ENST00000619968 63 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.33□□□□□ -1.88
HMGCS2P54868 AC090897.3-201ENST00000636973 1157 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
HMGCS2P54868 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
HMGCS2P54868 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HMGCS2P54868 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HMGCS2P54868 SAGE4P-201ENST00000442271 3381 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 AC010733.2-201ENST00000589496 5702 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 RNU6-413P-201ENST00000384115 107 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 MIR196B-201ENST00000384852 84 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 AL445529.1-201ENST00000398713 389 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 U3.42-201ENST00000408746 214 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HMGCS2P54868 RNA5SP274-201ENST00000410484 108 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.32□□□□□ -1.88
HMGCS2P54868 ELOCP9-201ENST00000418624 239 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 AC233981.1-201ENST00000423224 461 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.32□□□□□ -1.88
HMGCS2P54868 AC005517.2-201ENST00000424673 553 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.32□□□□□ -1.88
HMGCS2P54868 RPL31P54-201ENST00000429803 370 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HMGCS2P54868 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.32□□□□□ -1.88
HMGCS2P54868 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGCS2P54868 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.32□□□□□ -1.88
HMGCS2P54868 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.32□□□□□ -1.88
HMGCS2P54868 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGCS2P54868 USP9YP25-201ENST00000457708 443 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 RPL21P104-201ENST00000464143 478 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 VPS26AP1-201ENST00000483197 979 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGCS2P54868 AC008837.2-201ENST00000513076 418 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.32□□□□□ -1.88
HMGCS2P54868 AC016065.2-201ENST00000514530 444 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.32□□□□□ -1.88
HMGCS2P54868 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.32□□□□□ -1.88
HMGCS2P54868 AP001317.1-201ENST00000531194 960 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 MTCO2P15-201ENST00000532655 656 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGCS2P54868 MTND4P33-201ENST00000556706 766 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 AADACP1-206ENST00000561502 1193 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.32□□□□□ -1.88
HMGCS2P54868 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGCS2P54868 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.32□□□□□ -1.88
HMGCS2P54868 SNRPGP15-201ENST00000600149 222 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 AC234772.3-201ENST00000602277 528 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 AC091057.2-201ENST00000602594 792 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 AC069545.1-201ENST00000605671 358 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.32□□□□□ -1.88
HMGCS2P54868 RMST_8.1-201ENST00000610287 165 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 AC107075.1-201ENST00000613695 314 ntBASIC3.32□□□□□ -1.88
HMGCS2P54868 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.32□□□□□ -1.88
HMGCS2P54868 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HMGCS2P54868 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HMGCS2P54868 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HMGCS2P54868 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGCS2P54868 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGCS2P54868 MTND5P31-201ENST00000419366 1374 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 ELL2P4-201ENST00000446870 1376 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGCS2P54868 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
HMGCS2P54868 RNU6-1243P-201ENST00000364028 107 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 RNU4-28P-201ENST00000364739 141 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 AL121972.1-201ENST00000402023 252 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 AL133264.1-201ENST00000407157 562 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 AL136133.1-201ENST00000413694 376 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 RPL31P2-201ENST00000413849 377 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 AC244098.2-201ENST00000422068 99 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 XKRYP1-201ENST00000423438 492 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 XKRYP2-201ENST00000432915 492 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 CFTRP1-201ENST00000456646 183 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 AC078785.3-201ENST00000476607 425 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.31□□□□□ -1.88
HMGCS2P54868 MTCYBP16-201ENST00000509187 1129 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 AC112673.1-201ENST00000513168 575 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.31□□□□□ -1.88
HMGCS2P54868 RN7SKP287-201ENST00000516546 266 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGCS2P54868 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.31□□□□□ -1.88
HMGCS2P54868 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGCS2P54868 AL365503.1-201ENST00000605247 905 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HMGCS2P54868 AC013470.4-201ENST00000619978 986 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.31□□□□□ -1.88
HMGCS2P54868 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGCS2P54868 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGCS2P54868 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms