Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PRIM1P49642 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PRIM1P49642 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC7.03□□□□□ -1.28
PRIM1P49642 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PRIM1P49642 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PRIM1P49642 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PRIM1P49642 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
PRIM1P49642 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
PRIM1P49642 RBPJP2-201ENST00000618187 1444 ntBASIC7.02□□□□□ -1.29
PRIM1P49642 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PRIM1P49642 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PRIM1P49642 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
PRIM1P49642 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PRIM1P49642 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
PRIM1P49642 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PRIM1P49642 RNU6-280P-201ENST00000364145 104 ntBASIC7.02□□□□□ -1.29
PRIM1P49642 RNVU1-6-201ENST00000364688 164 ntBASIC7.02□□□□□ -1.29
PRIM1P49642 RNU6-715P-201ENST00000365204 103 ntBASIC7.02□□□□□ -1.29
PRIM1P49642 RNU6-946P-201ENST00000383878 107 ntBASIC7.02□□□□□ -1.29
PRIM1P49642 RN7SKP159-201ENST00000410657 292 ntBASIC7.02□□□□□ -1.29
PRIM1P49642 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC7.02□□□□□ -1.29
PRIM1P49642 AC008264.1-201ENST00000447612 367 ntBASIC7.02□□□□□ -1.29
PRIM1P49642 AC022431.1-201ENST00000450941 438 ntBASIC7.02□□□□□ -1.29
PRIM1P49642 Z92846.1-201ENST00000456203 268 ntBASIC7.02□□□□□ -1.29
PRIM1P49642 AC006511.1-201ENST00000470614 315 ntBASIC7.02□□□□□ -1.29
PRIM1P49642 AP001086.1-201ENST00000494882 321 ntBASIC7.02□□□□□ -1.29
PRIM1P49642 AC135721.1-201ENST00000497954 479 ntBASIC7.02□□□□□ -1.29
PRIM1P49642 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC7.02□□□□□ -1.29
PRIM1P49642 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC7.02□□□□□ -1.29
PRIM1P49642 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC7.02□□□□□ -1.29
PRIM1P49642 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC7.02□□□□□ -1.29
PRIM1P49642 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC7.02□□□□□ -1.29
PRIM1P49642 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC7.02□□□□□ -1.29
PRIM1P49642 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC7.02□□□□□ -1.29
PRIM1P49642 RN7SL52P-201ENST00000584271 284 ntBASIC7.02□□□□□ -1.29
PRIM1P49642 AC093799.2-201ENST00000610062 578 ntBASIC7.02□□□□□ -1.29
PRIM1P49642 RN7SL722P-201ENST00000617780 284 ntBASIC7.02□□□□□ -1.29
PRIM1P49642 RN7SL565P-201ENST00000618246 284 ntBASIC7.02□□□□□ -1.29
PRIM1P49642 AC241377.1-201ENST00000619797 406 ntBASIC7.02□□□□□ -1.29
PRIM1P49642 AC087385.3-201ENST00000620477 187 ntBASIC7.02□□□□□ -1.29
PRIM1P49642 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PRIM1P49642 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
PRIM1P49642 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.02□□□□□ -1.29
PRIM1P49642 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC7.02□□□□□ -1.29
PRIM1P49642 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC7.02□□□□□ -1.29
PRIM1P49642 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PRIM1P49642 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
PRIM1P49642 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
PRIM1P49642 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PRIM1P49642 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
PRIM1P49642 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PRIM1P49642 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC7.01□□□□□ -1.29
PRIM1P49642 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC7.01□□□□□ -1.29
PRIM1P49642 SNURFL-201ENST00000309296 343 ntBASIC7.01□□□□□ -1.29
PRIM1P49642 RNU6-1243P-201ENST00000364028 107 ntBASIC7.01□□□□□ -1.29
PRIM1P49642 RNU6-886P-201ENST00000384319 105 ntBASIC7.01□□□□□ -1.29
PRIM1P49642 MIR625-201ENST00000385047 85 ntBASIC7.01□□□□□ -1.29
PRIM1P49642 RNA5SP111-201ENST00000411386 101 ntBASIC7.01□□□□□ -1.29
PRIM1P49642 RAC1P3-201ENST00000416129 580 ntBASIC7.01□□□□□ -1.29
PRIM1P49642 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PRIM1P49642 C4BPAP2-201ENST00000428434 478 ntBASIC7.01□□□□□ -1.29
PRIM1P49642 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC7.01□□□□□ -1.29
PRIM1P49642 RPL23AP31-201ENST00000456160 467 ntBASIC7.01□□□□□ -1.29
PRIM1P49642 RPL21P103-201ENST00000479921 488 ntBASIC7.01□□□□□ -1.29
PRIM1P49642 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC7.01□□□□□ -1.29
PRIM1P49642 Y_RNA.703-201ENST00000516846 111 ntBASIC7.01□□□□□ -1.29
PRIM1P49642 AC069113.1-201ENST00000517763 267 ntBASIC7.01□□□□□ -1.29
PRIM1P49642 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC7.01□□□□□ -1.29
PRIM1P49642 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC7.01□□□□□ -1.29
PRIM1P49642 AC012433.1-201ENST00000588916 398 ntBASIC7.01□□□□□ -1.29
PRIM1P49642 RPS29P30-201ENST00000600975 111 ntBASIC7.01□□□□□ -1.29
PRIM1P49642 AL390123.1-201ENST00000603216 237 ntBASIC7.01□□□□□ -1.29
PRIM1P49642 RAC1P9-201ENST00000604990 392 ntBASIC7.01□□□□□ -1.29
PRIM1P49642 AC091905.4-201ENST00000623432 202 ntBASIC7.01□□□□□ -1.29
PRIM1P49642 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
PRIM1P49642 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PRIM1P49642 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
PRIM1P49642 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PRIM1P49642 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PRIM1P49642 AL031119.1-201ENST00000404707 1879 ntBASIC7□□□□□ -1.29
PRIM1P49642 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PRIM1P49642 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PRIM1P49642 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7□□□□□ -1.29
PRIM1P49642 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC7□□□□□ -1.29
PRIM1P49642 Y_RNA.64-201ENST00000362845 102 ntBASIC7□□□□□ -1.29
PRIM1P49642 Y_RNA.126-201ENST00000363382 111 ntBASIC7□□□□□ -1.29
PRIM1P49642 RNY1-201ENST00000364228 113 ntBASIC7□□□□□ -1.29
PRIM1P49642 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PRIM1P49642 Y_RNA.480-201ENST00000384364 102 ntBASIC7□□□□□ -1.29
PRIM1P49642 MIR517A-201ENST00000385001 87 ntBASIC7□□□□□ -1.29
PRIM1P49642 RNF10P1-201ENST00000418589 369 ntBASIC7□□□□□ -1.29
PRIM1P49642 AC245028.1-201ENST00000423259 256 ntBASIC7□□□□□ -1.29
PRIM1P49642 AC091390.1-201ENST00000433904 331 ntBASIC7□□□□□ -1.29
PRIM1P49642 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC7□□□□□ -1.29
PRIM1P49642 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC7□□□□□ -1.29
PRIM1P49642 RNU7-138P-201ENST00000459479 64 ntBASIC7□□□□□ -1.29
PRIM1P49642 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC7□□□□□ -1.29
PRIM1P49642 RNU4-71P-201ENST00000516258 113 ntBASIC7□□□□□ -1.29
PRIM1P49642 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC7□□□□□ -1.29
PRIM1P49642 AP003733.2-201ENST00000529409 171 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms