Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC010099.1-201ENST00000455434 375 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 AC147055.4-201ENST00000504399 745 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.52□□□□□ -1.85
CTNNA1P35221 AC109445.1-201ENST00000512356 383 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.52□□□□□ -1.85
CTNNA1P35221 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.52□□□□□ -1.85
CTNNA1P35221 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.52□□□□□ -1.85
CTNNA1P35221 SCARNA20.6-201ENST00000517251 106 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 OR7K1P-201ENST00000546439 926 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 AC090695.1-201ENST00000561269 1222 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.52□□□□□ -1.85
CTNNA1P35221 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.52□□□□□ -1.85
CTNNA1P35221 MIR4697-201ENST00000582977 78 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 VN1R85P-201ENST00000601587 426 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 AC005014.3-201ENST00000605985 190 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 AC131235.4-201ENST00000609288 620 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 AL121772.2-201ENST00000614331 297 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 AC109809.1-201ENST00000619665 545 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.52□□□□□ -1.85
CTNNA1P35221 SNORD39.4-201ENST00000620099 78 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 AC068831.8-201ENST00000620171 435 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.52□□□□□ -1.85
CTNNA1P35221 CR383658.2-201ENST00000547576 1525 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
CTNNA1P35221 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTNNA1P35221 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTNNA1P35221 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 RNU6-621P-201ENST00000364752 109 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 MIR122-201ENST00000385044 85 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CTNNA1P35221 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CTNNA1P35221 SNORD17-201ENST00000390930 237 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 TAF9BP1-201ENST00000396646 746 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 ERHP2-201ENST00000402323 299 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 MIR1284-201ENST00000408337 120 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.51□□□□□ -1.85
CTNNA1P35221 OR4K11P-201ENST00000431829 904 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 AC091390.1-201ENST00000433904 331 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.51□□□□□ -1.85
CTNNA1P35221 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.51□□□□□ -1.85
CTNNA1P35221 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.51□□□□□ -1.85
CTNNA1P35221 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CTNNA1P35221 SETP11-201ENST00000473027 690 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 AL049874.1-201ENST00000489560 388 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 AC104619.4-201ENST00000510773 249 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 AC079395.1-201ENST00000510981 262 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 AC092593.2-201ENST00000513866 913 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 SNORA31.22-201ENST00000517204 135 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 COX6CP8-201ENST00000522620 226 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CTNNA1P35221 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.51□□□□□ -1.85
CTNNA1P35221 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTNNA1P35221 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 UBE2NP1-201ENST00000545592 458 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CTNNA1P35221 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.51□□□□□ -1.85
CTNNA1P35221 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.51□□□□□ -1.85
CTNNA1P35221 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.51□□□□□ -1.85
CTNNA1P35221 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.51□□□□□ -1.85
CTNNA1P35221 AP001269.3-201ENST00000588718 329 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.51□□□□□ -1.85
CTNNA1P35221 AC079089.3-201ENST00000603094 673 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.51□□□□□ -1.85
CTNNA1P35221 AC099654.9-201ENST00000637055 678 ntBASIC3.51□□□□□ -1.85
CTNNA1P35221 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.51□□□□□ -1.85
CTNNA1P35221 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.51□□□□□ -1.85
CTNNA1P35221 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.51□□□□□ -1.85
CTNNA1P35221 SDAD1P2-201ENST00000441308 2028 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CTNNA1P35221 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CTNNA1P35221 AL161781.1-201ENST00000354277 403 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 RNU6-97P-201ENST00000363387 104 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 RNA5SP479-201ENST00000364858 117 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CTNNA1P35221 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CTNNA1P35221 Y_RNA.548-201ENST00000384656 105 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.5□□□□□ -1.85
CTNNA1P35221 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.5□□□□□ -1.85
CTNNA1P35221 AL356320.2-201ENST00000417263 507 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 SYF2P2-201ENST00000417620 583 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 AC006960.1-201ENST00000419980 153 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.5□□□□□ -1.85
CTNNA1P35221 PPP1R11P2-201ENST00000423543 382 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 TAAR7P-201ENST00000436141 242 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.5□□□□□ -1.85
CTNNA1P35221 AC009237.8-201ENST00000445492 379 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.5□□□□□ -1.85
CTNNA1P35221 AL031313.1-201ENST00000448435 256 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.5□□□□□ -1.85
CTNNA1P35221 SNORD121B-201ENST00000458838 81 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 RPS29P12-201ENST00000460178 152 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 RPL7P5-201ENST00000471472 736 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 ACTR3P3-201ENST00000480448 893 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 PRELID3BP5-201ENST00000508612 460 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 FCF1P8-201ENST00000510322 597 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 RNU1-95P-201ENST00000516357 160 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 RNU1-128P-201ENST00000516704 160 ntBASIC3.5□□□□□ -1.85
CTNNA1P35221 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CTNNA1P35221 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.5□□□□□ -1.85
CTNNA1P35221 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms