Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC5.81□□□□□ -1.48
RXRBP28702 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RXRBP28702 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.81□□□□□ -1.48
RXRBP28702 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.81□□□□□ -1.48
RXRBP28702 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.81□□□□□ -1.48
RXRBP28702 RPS24P8-201ENST00000431490 402 ntBASIC5.81□□□□□ -1.48
RXRBP28702 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.81□□□□□ -1.48
RXRBP28702 AL136380.1-201ENST00000447970 162 ntBASIC5.81□□□□□ -1.48
RXRBP28702 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.81□□□□□ -1.48
RXRBP28702 RPS27AP1-201ENST00000475545 471 ntBASIC5.81□□□□□ -1.48
RXRBP28702 EIF4EP3-201ENST00000498782 656 ntBASIC5.81□□□□□ -1.48
RXRBP28702 RPL38P4-201ENST00000502376 214 ntBASIC5.81□□□□□ -1.48
RXRBP28702 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.81□□□□□ -1.48
RXRBP28702 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RXRBP28702 AC090502.2-201ENST00000549267 280 ntBASIC5.81□□□□□ -1.48
RXRBP28702 AL389895.1-201ENST00000554127 252 ntBASIC5.81□□□□□ -1.48
RXRBP28702 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.81□□□□□ -1.48
RXRBP28702 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.81□□□□□ -1.48
RXRBP28702 AL669831.4-202ENST00000590817 238 ntBASIC5.81□□□□□ -1.48
RXRBP28702 AC005255.1-201ENST00000593748 216 ntBASIC5.81□□□□□ -1.48
RXRBP28702 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.81□□□□□ -1.48
RXRBP28702 AC006363.1-201ENST00000603806 463 ntBASIC5.81□□□□□ -1.48
RXRBP28702 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RXRBP28702 U6.105-201ENST00000637379 88 ntBASIC5.81□□□□□ -1.48
RXRBP28702 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RXRBP28702 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.81□□□□□ -1.48
RXRBP28702 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RXRBP28702 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
RXRBP28702 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RXRBP28702 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RXRBP28702 AL450345.1-202ENST00000605741 3881 ntBASIC5.8□□□□□ -1.48
RXRBP28702 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RXRBP28702 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
RXRBP28702 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RXRBP28702 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RXRBP28702 Y_RNA.445-201ENST00000384168 102 ntBASIC5.8□□□□□ -1.48
RXRBP28702 RNU6-505P-201ENST00000384427 107 ntBASIC5.8□□□□□ -1.48
RXRBP28702 RN7SKP222-201ENST00000410651 315 ntBASIC5.8□□□□□ -1.48
RXRBP28702 PMCHL1-202ENST00000423102 261 ntBASIC5.8□□□□□ -1.48
RXRBP28702 AP000907.1-201ENST00000428428 510 ntBASIC5.8□□□□□ -1.48
RXRBP28702 USP9YP16-201ENST00000430287 407 ntBASIC5.8□□□□□ -1.48
RXRBP28702 RPL12P18-201ENST00000437175 325 ntBASIC5.8□□□□□ -1.48
RXRBP28702 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.8□□□□□ -1.48
RXRBP28702 BNIP3P2-201ENST00000441221 577 ntBASIC5.8□□□□□ -1.48
RXRBP28702 AL451050.1-201ENST00000450126 415 ntBASIC5.8□□□□□ -1.48
RXRBP28702 USP9YP23-201ENST00000455085 407 ntBASIC5.8□□□□□ -1.48
RXRBP28702 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.8□□□□□ -1.48
RXRBP28702 AP001486.1-201ENST00000463339 476 ntBASIC5.8□□□□□ -1.48
RXRBP28702 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.8□□□□□ -1.48
RXRBP28702 RNU6-1137P-201ENST00000517073 99 ntBASIC5.8□□□□□ -1.48
RXRBP28702 RNU6-1220P-201ENST00000517126 108 ntBASIC5.8□□□□□ -1.48
RXRBP28702 Y_RNA.720-201ENST00000517166 92 ntBASIC5.8□□□□□ -1.48
RXRBP28702 AP003072.2-201ENST00000527756 676 ntBASIC5.8□□□□□ -1.48
RXRBP28702 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.8□□□□□ -1.48
RXRBP28702 AC026464.5-201ENST00000562497 722 ntBASIC5.8□□□□□ -1.48
RXRBP28702 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.8□□□□□ -1.48
RXRBP28702 MIR3149-201ENST00000584629 83 ntBASIC5.8□□□□□ -1.48
RXRBP28702 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.8□□□□□ -1.48
RXRBP28702 XIAPP1-201ENST00000603162 600 ntBASIC5.8□□□□□ -1.48
RXRBP28702 AC080078.3-201ENST00000605407 463 ntBASIC5.8□□□□□ -1.48
RXRBP28702 AC019193.3-201ENST00000609144 554 ntBASIC5.8□□□□□ -1.48
RXRBP28702 FAM27D1-201ENST00000612308 341 ntBASIC5.8□□□□□ -1.48
RXRBP28702 AC087588.2-201ENST00000617667 426 ntBASIC5.8□□□□□ -1.48
RXRBP28702 AC009237.17-201ENST00000618111 748 ntBASIC5.8□□□□□ -1.48
RXRBP28702 MTND4LP32-201ENST00000636111 270 ntBASIC5.8□□□□□ -1.48
RXRBP28702 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RXRBP28702 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.8□□□□□ -1.48
RXRBP28702 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RXRBP28702 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
RXRBP28702 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RXRBP28702 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.79□□□□□ -1.48
RXRBP28702 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.79□□□□□ -1.48
RXRBP28702 OR4G1P-203ENST00000641984 1631 ntBASIC5.79□□□□□ -1.48
RXRBP28702 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RXRBP28702 UBBP2-201ENST00000376781 231 ntBASIC5.79□□□□□ -1.48
RXRBP28702 RNU6-1151P-201ENST00000384684 107 ntBASIC5.79□□□□□ -1.48
RXRBP28702 RNVU1-14-201ENST00000384770 164 ntBASIC5.79□□□□□ -1.48
RXRBP28702 RNA5SP241-201ENST00000391326 114 ntBASIC5.79□□□□□ -1.48
RXRBP28702 HMGB1P17-201ENST00000403495 628 ntBASIC5.79□□□□□ -1.48
RXRBP28702 AL590290.1-201ENST00000405336 380 ntBASIC5.79□□□□□ -1.48
RXRBP28702 RNU2-9P-201ENST00000410194 145 ntBASIC5.79□□□□□ -1.48
RXRBP28702 AC009302.1-201ENST00000417147 390 ntBASIC5.79□□□□□ -1.48
RXRBP28702 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.79□□□□□ -1.48
RXRBP28702 RGS17P1-201ENST00000423358 553 ntBASIC5.79□□□□□ -1.48
RXRBP28702 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.79□□□□□ -1.48
RXRBP28702 HMGN2P31-201ENST00000432430 273 ntBASIC5.79□□□□□ -1.48
RXRBP28702 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.79□□□□□ -1.48
RXRBP28702 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RXRBP28702 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.79□□□□□ -1.48
RXRBP28702 RNU7-152P-201ENST00000458982 64 ntBASIC5.79□□□□□ -1.48
RXRBP28702 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.79□□□□□ -1.48
RXRBP28702 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RXRBP28702 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
RXRBP28702 AC004908.2-201ENST00000609090 574 ntBASIC5.79□□□□□ -1.48
RXRBP28702 BX664608.1-201ENST00000610519 487 ntBASIC5.79□□□□□ -1.48
RXRBP28702 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.79□□□□□ -1.48
RXRBP28702 MIR6891-201ENST00000618788 93 ntBASIC5.79□□□□□ -1.48
RXRBP28702 AC119674.1-207ENST00000641355 633 ntBASIC5.79□□□□□ -1.48
RXRBP28702 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.79□□□□□ -1.48
RXRBP28702 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms