Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL8A1P27658 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.12□□□□□ -1.59
COL8A1P27658 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COL8A1P27658 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL8A1P27658 AC130650.2-201ENST00000618736 2403 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.12□□□□□ -1.59
COL8A1P27658 SNORD113-8-201ENST00000363497 74 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 RNU6-1284P-201ENST00000363701 100 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 Y_RNA.261-201ENST00000364631 102 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 RNA5SP478-201ENST00000364657 115 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 RNU6-1130P-201ENST00000365434 107 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.12□□□□□ -1.59
COL8A1P27658 Y_RNA.400-201ENST00000383963 111 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 Y_RNA.480-201ENST00000384364 102 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 Y_RNA.533-201ENST00000384596 114 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
COL8A1P27658 CYB5AP4-201ENST00000396692 399 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 AL591034.2-201ENST00000402839 359 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 AC096921.1-201ENST00000411661 375 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.12□□□□□ -1.59
COL8A1P27658 BX679664.1-201ENST00000434429 253 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.12□□□□□ -1.59
COL8A1P27658 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.12□□□□□ -1.59
COL8A1P27658 FABP5P13-201ENST00000452144 328 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 AC091153.1-201ENST00000466297 402 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.12□□□□□ -1.59
COL8A1P27658 RPS21P4-201ENST00000487122 248 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 PDCD5P2-201ENST00000507570 312 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 RNU6-1219P-201ENST00000516143 112 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 AC069113.1-201ENST00000517763 267 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 AC112693.2-201ENST00000556538 232 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL8A1P27658 AC096996.1-201ENST00000563813 325 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.12□□□□□ -1.59
COL8A1P27658 FAM60BP-201ENST00000578364 658 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 MIR4330-201ENST00000579077 105 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.12□□□□□ -1.59
COL8A1P27658 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.12□□□□□ -1.59
COL8A1P27658 AC011487.3-201ENST00000593607 453 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 AL158827.2-201ENST00000602494 330 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.12□□□□□ -1.59
COL8A1P27658 FP236240.3-201ENST00000623061 327 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 AC097372.5-201ENST00000623665 376 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 AL691447.3-201ENST00000635020 330 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
COL8A1P27658 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
COL8A1P27658 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL8A1P27658 AL121839.2-201ENST00000565058 6943 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
COL8A1P27658 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
COL8A1P27658 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.12□□□□□ -1.59
COL8A1P27658 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.12□□□□□ -1.59
COL8A1P27658 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COL8A1P27658 AC011455.2-201ENST00000599320 3336 ntBASIC5.12□□□□□ -1.59
COL8A1P27658 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL8A1P27658 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.11□□□□□ -1.59
COL8A1P27658 ZNF299P-201ENST00000406845 1804 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL8A1P27658 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
COL8A1P27658 AL591135.1-201ENST00000401578 5914 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 AC107021.2-201ENST00000567714 2095 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 PRO1804-201ENST00000623780 2050 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL8A1P27658 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.11□□□□□ -1.59
COL8A1P27658 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL8A1P27658 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL8A1P27658 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL8A1P27658 U3.13-201ENST00000364804 214 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.11□□□□□ -1.59
COL8A1P27658 TMEM167AP1-201ENST00000423409 219 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL8A1P27658 AL049745.1-201ENST00000433953 286 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.11□□□□□ -1.59
COL8A1P27658 PIGFP3-201ENST00000441918 722 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.11□□□□□ -1.59
COL8A1P27658 PPIAP3-201ENST00000450588 505 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 SSXP4-201ENST00000451349 245 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.11□□□□□ -1.59
COL8A1P27658 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.11□□□□□ -1.59
COL8A1P27658 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.11□□□□□ -1.59
COL8A1P27658 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.11□□□□□ -1.59
COL8A1P27658 AC093767.1-201ENST00000504523 156 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL8A1P27658 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 RNU2-31P-201ENST00000516954 155 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.11□□□□□ -1.59
COL8A1P27658 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC5.11□□□□□ -1.59
COL8A1P27658 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.11□□□□□ -1.59
COL8A1P27658 AL442163.3-201ENST00000554110 156 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.11□□□□□ -1.59
COL8A1P27658 CPDP1-201ENST00000579660 283 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.11□□□□□ -1.59
COL8A1P27658 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 Y_RNA.772-201ENST00000606692 102 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 AL590099.1-201ENST00000615276 138 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 TCL6_3.1-201ENST00000619064 137 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 AC091953.3-201ENST00000623220 236 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 U6.92-201ENST00000636464 89 ntBASIC5.11□□□□□ -1.59
COL8A1P27658 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms