| TFE3 | P19532 | ANKRD36B-202 | ENST00000359901 | 4297 nt | APPRIS P1 TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | INTU-201 | ENST00000335251 | 13233 nt | APPRIS P1 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AL450326.2-201 | ENST00000421913 | 1962 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | WEE2-201 | ENST00000397541 | 3061 nt | APPRIS P1 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | IRF5P1-201 | ENST00000504852 | 2164 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AC092447.5-201 | ENST00000429367 | 2741 nt | TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AC011155.1-201 | ENST00000316512 | 456 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | Y_RNA.212-201 | ENST00000364177 | 102 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | CARD16-202 | ENST00000375706 | 686 nt | APPRIS P1 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | Y_RNA.445-201 | ENST00000384168 | 102 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | RNU6-1160P-201 | ENST00000384546 | 104 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | MIR105-2-201 | ENST00000385083 | 81 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | UBE2V1P2-201 | ENST00000397758 | 440 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | GLULP6-201 | ENST00000399502 | 913 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AL109941.1-201 | ENST00000401925 | 229 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AL449043.1-202 | ENST00000427318 | 582 nt | TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | RPL21P112-201 | ENST00000434403 | 463 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | FAR2P1-203 | ENST00000440931 | 187 nt | TSL 2 BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | LINC01510-201 | ENST00000441991 | 468 nt | TSL 3 BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AC095032.1-201 | ENST00000444810 | 527 nt | TSL 3 BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AL356981.1-201 | ENST00000454879 | 684 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | MME-AS1-201 | ENST00000484721 | 828 nt | TSL 2 BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | CREM-238 | ENST00000488741 | 651 nt | TSL 2 BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | MDM4-213 | ENST00000507825 | 481 nt | TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AC093689.1-201 | ENST00000514737 | 246 nt | TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | RNU6-189P-201 | ENST00000516120 | 101 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | RNU6-1088P-201 | ENST00000516850 | 104 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | RNU6-685P-201 | ENST00000517088 | 95 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AC027308.1-201 | ENST00000517993 | 110 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | STX3-204 | ENST00000530221 | 534 nt | TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AC005868.1-201 | ENST00000536421 | 331 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AC006349.1-201 | ENST00000555526 | 235 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AC106782.4-201 | ENST00000568264 | 210 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | MIR4790-201 | ENST00000577799 | 79 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AC006270.2-201 | ENST00000578523 | 652 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AP001496.1-201 | ENST00000579113 | 471 nt | TSL 4 BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | BX005214.3-202 | ENST00000619809 | 325 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AC110801.1-201 | ENST00000623590 | 212 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | WDR75-207 | ENST00000631047 | 270 nt | TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | LINC01002-236 | ENST00000634022 | 378 nt | TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | CYLC2-204 | ENST00000612124 | 1817 nt | APPRIS P1 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | NBPF14-206 | ENST00000614999 | 10080 nt | TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | DTHD1-205 | ENST00000507598 | 2606 nt | TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | PIK3C3-201 | ENST00000262039 | 9443 nt | APPRIS P1 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | RAP1GDS1-206 | ENST00000453712 | 2470 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| TFE3 | P19532 | MOXD1-201 | ENST00000336749 | 2950 nt | TSL 1 (best) BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | SKP1-202 | ENST00000353411 | 9474 nt | APPRIS P4 TSL 1 (best) BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | EMSY-205 | ENST00000524767 | 4116 nt | TSL 1 (best) BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | HERC1-201 | ENST00000443617 | 15137 nt | APPRIS P1 TSL 1 (best) BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | SCN1A-201 | ENST00000303395 | 8533 nt | APPRIS ALT1 TSL 5 BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | MUM1L1-202 | ENST00000357175 | 4173 nt | APPRIS P1 TSL 2 BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | FAM184A-204 | ENST00000368475 | 3392 nt | TSL 2 BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | Y_RNA.146-201 | ENST00000363549 | 102 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AL590705.3-201 | ENST00000416066 | 474 nt | TSL 1 (best) BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | ACTR3BP6-201 | ENST00000422332 | 1241 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AL138785.1-201 | ENST00000425821 | 331 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AC093106.2-201 | ENST00000428212 | 385 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | ZFY-AS1-202 | ENST00000431145 | 419 nt | TSL 3 BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AL080284.1-201 | ENST00000434493 | 442 nt | TSL 2 BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AC093414.1-201 | ENST00000434712 | 514 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AL121871.1-201 | ENST00000443413 | 436 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AC020550.1-201 | ENST00000447385 | 163 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AL133481.3-201 | ENST00000456546 | 333 nt | TSL 3 BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | SCARNA18-201 | ENST00000459004 | 134 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AC116533.1-201 | ENST00000459748 | 321 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | RN7SL319P-201 | ENST00000480656 | 221 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AC023424.1-201 | ENST00000496058 | 459 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | LIAS-206 | ENST00000513731 | 826 nt | TSL 5 BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | RNU6-256P-201 | ENST00000516747 | 97 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | MS4A4E-206 | ENST00000528394 | 555 nt | TSL 1 (best) BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AC093012.1-202 | ENST00000549403 | 582 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AL163153.1-201 | ENST00000554223 | 283 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AC012182.1-201 | ENST00000570133 | 895 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | LINC02210-208 | ENST00000585118 | 546 nt | TSL 1 (best) BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AL034351.1-201 | ENST00000605288 | 668 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AC037198.3-201 | ENST00000616754 | 526 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AC103705.1-201 | ENST00000619013 | 241 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AL589994.2-201 | ENST00000621124 | 579 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AL445363.3-201 | ENST00000623080 | 671 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AL359757.2-201 | ENST00000624309 | 274 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | MIR4275-201 | ENST00000636486 | 87 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | CCDC25-212 | ENST00000640944 | 261 nt | TSL 5 BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | RMDN2-204 | ENST00000406384 | 1932 nt | APPRIS P1 TSL 1 (best) BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | RALGAPA1-204 | ENST00000553892 | 6271 nt | TSL 5 BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | AL731532.2-201 | ENST00000623542 | 1953 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | SDC2-204 | ENST00000519914 | 1318 nt | TSL 2 BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | PPEF1-202 | ENST00000361511 | 2890 nt | APPRIS P1 TSL 1 (best) BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | C3orf67-AS1-202 | ENST00000482372 | 2203 nt | TSL 2 BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | EPHA7-202 | ENST00000369303 | 6588 nt | APPRIS P1 TSL 1 (best) BASIC | 5.16 | □□□□□ -1.58 | | |
| TFE3 | P19532 | PTK2-212 | ENST00000519419 | 4439 nt | TSL 5 BASIC | 5.15 | □□□□□ -1.58 | | |
| TFE3 | P19532 | GABRG2-202 | ENST00000361925 | 3767 nt | TSL 3 BASIC | 5.15 | □□□□□ -1.58 | | |
| TFE3 | P19532 | EYA1-203 | ENST00000388740 | 3788 nt | TSL 5 BASIC | 5.15 | □□□□□ -1.58 | | |
| TFE3 | P19532 | RAD17-220 | ENST00000616683 | 3057 nt | TSL 1 (best) BASIC | 5.15 | □□□□□ -1.58 | | |
| TFE3 | P19532 | PCDH9-203 | ENST00000456367 | 5072 nt | TSL 1 (best) BASIC | 5.15 | □□□□□ -1.58 | | |
| TFE3 | P19532 | ATXN3L-201 | ENST00000380622 | 2164 nt | APPRIS P1 BASIC | 5.15 | □□□□□ -1.58 | | |
| TFE3 | P19532 | ANK2-202 | ENST00000357077 | 14196 nt | APPRIS P3 TSL 1 (best) BASIC | 5.15 | □□□□□ -1.58 | | |
| TFE3 | P19532 | CDKL3-209 | ENST00000523054 | 1775 nt | TSL 2 BASIC | 5.15 | □□□□□ -1.58 | | |
| TFE3 | P19532 | MTCO1P12-201 | ENST00000414273 | 1543 nt | BASIC | 5.15 | □□□□□ -1.58 | | |
| TFE3 | P19532 | SNORA63C-201 | ENST00000364578 | 129 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RNU6-946P-201 | ENST00000383878 | 107 nt | BASIC | 5.15 | □□□□□ -1.59 | | |