Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 RPL21P23-201ENST00000446654 460 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 HMGB3P21-201ENST00000452483 547 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXD8P13378 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXD8P13378 SNORD121B-201ENST00000458838 81 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 SNORD97-201ENST00000459187 142 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 RPS17P2-201ENST00000461663 408 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 AC104472.2-201ENST00000469035 601 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 TRBV1-201ENST00000476502 284 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXD8P13378 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXD8P13378 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXD8P13378 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.56□□□□□ -1.52
HOXD8P13378 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.56□□□□□ -1.52
HOXD8P13378 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXD8P13378 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXD8P13378 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.56□□□□□ -1.52
HOXD8P13378 RN7SL290P-201ENST00000578661 300 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 AC113195.1-201ENST00000579952 141 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 AC024619.4-201ENST00000580924 316 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 AL109918.3-201ENST00000603072 338 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 AC008745.1-201ENST00000604064 271 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXD8P13378 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXD8P13378 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXD8P13378 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXD8P13378 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
HOXD8P13378 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXD8P13378 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
HOXD8P13378 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXD8P13378 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXD8P13378 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
HOXD8P13378 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXD8P13378 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXD8P13378 AL121839.2-201ENST00000565058 6943 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD8P13378 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXD8P13378 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXD8P13378 SAMMSON-226ENST00000642089 1582 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD8P13378 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD8P13378 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXD8P13378 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD8P13378 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD8P13378 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD8P13378 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HOXD8P13378 RNU6-379P-201ENST00000363813 104 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD8P13378 Y_RNA.428-201ENST00000384078 102 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 Y_RNA.489-201ENST00000384410 101 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 SNORA75.6-201ENST00000391318 127 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD8P13378 RNU6-1050P-201ENST00000410388 107 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 RNU2-50P-201ENST00000410494 143 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 RNU6-516P-201ENST00000411381 104 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXD8P13378 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXD8P13378 ATG3P1-201ENST00000419507 911 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXD8P13378 CALM2P2-201ENST00000428512 440 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXD8P13378 RPL23AP50-201ENST00000434149 455 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXD8P13378 AL450023.3-201ENST00000440592 271 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXD8P13378 RPS24P13-201ENST00000442520 397 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXD8P13378 RPL23AP56-201ENST00000460778 453 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 RPL21P93-201ENST00000480465 489 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 RNU6-1092P-201ENST00000516955 87 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXD8P13378 AL358913.1-201ENST00000554342 121 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.55□□□□□ -1.52
HOXD8P13378 RN7SL690P-201ENST00000582087 240 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 AC005191.1-201ENST00000603950 358 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 AC008162.1-201ENST00000604718 254 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 AL670379.4-201ENST00000605279 254 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 AC012443.1-201ENST00000605605 231 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 U2.1-201ENST00000618978 145 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 MIR7641-1-201ENST00000627518 61 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HOXD8P13378 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD8P13378 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD8P13378 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HOXD8P13378 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HOXD8P13378 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD8P13378 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HOXD8P13378 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXD8P13378 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD8P13378 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD8P13378 AC005592.1-201ENST00000566527 1640 ntBASIC5.55□□□□□ -1.52
HOXD8P13378 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD8P13378 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD8P13378 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD8P13378 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HOXD8P13378 BCORP1-203ENST00000513194 5093 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXD8P13378 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
HOXD8P13378 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms