Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
LCATP04180 USP8P1-201ENST00000494673 3183 ntBASIC3.69□□□□□ -1.82
LCATP04180 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
LCATP04180 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LCATP04180 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.69□□□□□ -1.82
LCATP04180 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
LCATP04180 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LCATP04180 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
LCATP04180 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LCATP04180 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LCATP04180 RNA5SP258-201ENST00000362750 119 ntBASIC3.69□□□□□ -1.82
LCATP04180 Y_RNA.234-201ENST00000364409 97 ntBASIC3.69□□□□□ -1.82
LCATP04180 Y_RNA.256-201ENST00000364594 104 ntBASIC3.69□□□□□ -1.82
LCATP04180 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
LCATP04180 RNY3P14-201ENST00000384309 102 ntBASIC3.69□□□□□ -1.82
LCATP04180 RNU6-1207P-201ENST00000384343 107 ntBASIC3.69□□□□□ -1.82
LCATP04180 CALM2P3-201ENST00000400429 449 ntBASIC3.69□□□□□ -1.82
LCATP04180 MIR1277-201ENST00000408536 78 ntBASIC3.69□□□□□ -1.82
LCATP04180 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.69□□□□□ -1.82
LCATP04180 RNA5SP36-201ENST00000410197 133 ntBASIC3.69□□□□□ -1.82
LCATP04180 RNU2-37P-201ENST00000410695 177 ntBASIC3.69□□□□□ -1.82
LCATP04180 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.69□□□□□ -1.82
LCATP04180 AC069157.1-201ENST00000421749 137 ntBASIC3.69□□□□□ -1.82
LCATP04180 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.69□□□□□ -1.82
LCATP04180 AL157831.1-201ENST00000426134 473 ntBASIC3.69□□□□□ -1.82
LCATP04180 AC006548.1-201ENST00000427470 102 ntBASIC3.69□□□□□ -1.82
LCATP04180 DPPA2P1-201ENST00000428060 556 ntBASIC3.69□□□□□ -1.82
LCATP04180 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.69□□□□□ -1.82
LCATP04180 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.69□□□□□ -1.82
LCATP04180 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.69□□□□□ -1.82
LCATP04180 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.69□□□□□ -1.82
LCATP04180 FCF1P1-201ENST00000432690 571 ntBASIC3.69□□□□□ -1.82
LCATP04180 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.69□□□□□ -1.82
LCATP04180 RPL23AP89-201ENST00000439324 255 ntBASIC3.69□□□□□ -1.82
LCATP04180 C1DP4-201ENST00000455429 424 ntBASIC3.69□□□□□ -1.82
LCATP04180 AL359385.1-201ENST00000456509 365 ntBASIC3.69□□□□□ -1.82
LCATP04180 RPS29P33-201ENST00000456717 146 ntBASIC3.69□□□□□ -1.82
LCATP04180 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
LCATP04180 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.69□□□□□ -1.82
LCATP04180 RPS3AP14-201ENST00000483907 780 ntBASIC3.69□□□□□ -1.82
LCATP04180 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.69□□□□□ -1.82
LCATP04180 AP001086.1-201ENST00000494882 321 ntBASIC3.69□□□□□ -1.82
LCATP04180 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.69□□□□□ -1.82
LCATP04180 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.69□□□□□ -1.82
LCATP04180 AC114967.1-201ENST00000504890 259 ntBASIC3.69□□□□□ -1.82
LCATP04180 AC093824.1-201ENST00000508796 343 ntBASIC3.69□□□□□ -1.82
LCATP04180 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.69□□□□□ -1.82
LCATP04180 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.69□□□□□ -1.82
LCATP04180 FAM92A1P1-201ENST00000528023 890 ntBASIC3.69□□□□□ -1.82
LCATP04180 OR5D17P-201ENST00000531492 978 ntBASIC3.69□□□□□ -1.82
LCATP04180 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.69□□□□□ -1.82
LCATP04180 AC123904.2-201ENST00000548059 300 ntBASIC3.69□□□□□ -1.82
LCATP04180 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.69□□□□□ -1.82
LCATP04180 AC006504.3-201ENST00000586818 523 ntBASIC3.69□□□□□ -1.82
LCATP04180 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.69□□□□□ -1.82
LCATP04180 AC011816.2-201ENST00000607089 556 ntBASIC3.69□□□□□ -1.82
LCATP04180 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.69□□□□□ -1.82
LCATP04180 AL031666.3-201ENST00000609320 1006 ntBASIC3.69□□□□□ -1.82
LCATP04180 BX664608.1-201ENST00000610519 487 ntBASIC3.69□□□□□ -1.82
LCATP04180 AC009268.2-201ENST00000621925 457 ntBASIC3.69□□□□□ -1.82
LCATP04180 AL732618.1-201ENST00000623251 301 ntBASIC3.69□□□□□ -1.82
LCATP04180 CR381572.1-201ENST00000625098 102 ntBASIC3.69□□□□□ -1.82
LCATP04180 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
LCATP04180 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LCATP04180 AL158163.1-201ENST00000603915 1649 ntBASIC3.69□□□□□ -1.82
LCATP04180 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LCATP04180 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
LCATP04180 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.69□□□□□ -1.82
LCATP04180 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.68□□□□□ -1.82
LCATP04180 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LCATP04180 RNU6-761P-201ENST00000384148 107 ntBASIC3.68□□□□□ -1.82
LCATP04180 RNU6-1103P-201ENST00000384150 107 ntBASIC3.68□□□□□ -1.82
LCATP04180 Y_RNA.493-201ENST00000384422 102 ntBASIC3.68□□□□□ -1.82
LCATP04180 RPL23AP32-201ENST00000395315 459 ntBASIC3.68□□□□□ -1.82
LCATP04180 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LCATP04180 CCNG1P1-201ENST00000406783 885 ntBASIC3.68□□□□□ -1.82
LCATP04180 RN7SKP235-201ENST00000410662 305 ntBASIC3.68□□□□□ -1.82
LCATP04180 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.68□□□□□ -1.82
LCATP04180 AC011933.1-201ENST00000413334 321 ntBASIC3.68□□□□□ -1.82
LCATP04180 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.68□□□□□ -1.82
LCATP04180 AL391219.1-201ENST00000422570 483 ntBASIC3.68□□□□□ -1.82
LCATP04180 AC245028.1-201ENST00000423259 256 ntBASIC3.68□□□□□ -1.82
LCATP04180 DNAJC19P7-201ENST00000428811 344 ntBASIC3.68□□□□□ -1.82
LCATP04180 AC073464.1-201ENST00000429823 534 ntBASIC3.68□□□□□ -1.82
LCATP04180 RPL31P35-201ENST00000431058 377 ntBASIC3.68□□□□□ -1.82
LCATP04180 NEK4P1-201ENST00000433383 879 ntBASIC3.68□□□□□ -1.82
LCATP04180 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.68□□□□□ -1.82
LCATP04180 AC116533.1-201ENST00000459748 321 ntBASIC3.68□□□□□ -1.82
LCATP04180 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
LCATP04180 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.68□□□□□ -1.82
LCATP04180 AC092989.1-201ENST00000481235 277 ntBASIC3.68□□□□□ -1.82
LCATP04180 RPS23P1-201ENST00000491662 432 ntBASIC3.68□□□□□ -1.82
LCATP04180 AC019235.1-201ENST00000503847 207 ntBASIC3.68□□□□□ -1.82
LCATP04180 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.68□□□□□ -1.82
LCATP04180 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.68□□□□□ -1.82
LCATP04180 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.68□□□□□ -1.82
LCATP04180 AL592156.1-201ENST00000508758 304 ntBASIC3.68□□□□□ -1.82
LCATP04180 AC009646.1-201ENST00000510455 318 ntBASIC3.68□□□□□ -1.82
LCATP04180 MTCO3P44-201ENST00000510977 541 ntBASIC3.68□□□□□ -1.82
LCATP04180 AC093840.1-201ENST00000511599 336 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms