Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RPS20P32-201ENST00000456044 356 ntBASIC3.51□□□□□ -1.85
VTNP04004 TRBV26-201ENST00000456572 344 ntBASIC3.51□□□□□ -1.85
VTNP04004 AC087312.1-201ENST00000471411 480 ntBASIC3.51□□□□□ -1.85
VTNP04004 AC078817.1-201ENST00000492623 435 ntBASIC3.51□□□□□ -1.85
VTNP04004 KLRA1P-201ENST00000503499 986 ntBASIC3.51□□□□□ -1.85
VTNP04004 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.51□□□□□ -1.85
VTNP04004 PCBP2P3-201ENST00000509726 843 ntBASIC3.51□□□□□ -1.85
VTNP04004 HSPE1P23-201ENST00000509838 286 ntBASIC3.51□□□□□ -1.85
VTNP04004 AC021146.1-201ENST00000511202 716 ntBASIC3.51□□□□□ -1.85
VTNP04004 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.51□□□□□ -1.85
VTNP04004 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.51□□□□□ -1.85
VTNP04004 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.51□□□□□ -1.85
VTNP04004 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
VTNP04004 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.51□□□□□ -1.85
VTNP04004 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.51□□□□□ -1.85
VTNP04004 AL389895.1-201ENST00000554127 252 ntBASIC3.51□□□□□ -1.85
VTNP04004 TGIF1P1-201ENST00000558095 802 ntBASIC3.51□□□□□ -1.85
VTNP04004 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.51□□□□□ -1.85
VTNP04004 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.51□□□□□ -1.85
VTNP04004 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.51□□□□□ -1.85
VTNP04004 AC008088.1-201ENST00000580993 280 ntBASIC3.51□□□□□ -1.85
VTNP04004 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.51□□□□□ -1.85
VTNP04004 AL451007.1-201ENST00000595491 289 ntBASIC3.51□□□□□ -1.85
VTNP04004 BNIP3P11-201ENST00000603878 563 ntBASIC3.51□□□□□ -1.85
VTNP04004 AC069304.2-201ENST00000605154 435 ntBASIC3.51□□□□□ -1.85
VTNP04004 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.51□□□□□ -1.85
VTNP04004 AC135507.2-201ENST00000612443 309 ntBASIC3.51□□□□□ -1.85
VTNP04004 uc_338.25-201ENST00000613756 156 ntBASIC3.51□□□□□ -1.85
VTNP04004 AC008083.4-201ENST00000615076 444 ntBASIC3.51□□□□□ -1.85
VTNP04004 U7.8-201ENST00000619968 63 ntBASIC3.51□□□□□ -1.85
VTNP04004 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.51□□□□□ -1.85
VTNP04004 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.51□□□□□ -1.85
VTNP04004 AC008725.1-201ENST00000605123 2263 ntBASIC3.51□□□□□ -1.85
VTNP04004 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
VTNP04004 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.51□□□□□ -1.85
VTNP04004 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.51□□□□□ -1.85
VTNP04004 MTND5P24-201ENST00000438892 1767 ntBASIC3.51□□□□□ -1.85
VTNP04004 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.5□□□□□ -1.85
VTNP04004 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VTNP04004 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VTNP04004 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VTNP04004 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VTNP04004 RNU6-931P-201ENST00000363850 107 ntBASIC3.5□□□□□ -1.85
VTNP04004 RNVU1-3-201ENST00000364313 161 ntBASIC3.5□□□□□ -1.85
VTNP04004 RNA5SP167-201ENST00000365461 116 ntBASIC3.5□□□□□ -1.85
VTNP04004 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VTNP04004 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
VTNP04004 SNORA51.6-201ENST00000384151 125 ntBASIC3.5□□□□□ -1.85
VTNP04004 SNORD116-2-201ENST00000384274 95 ntBASIC3.5□□□□□ -1.85
VTNP04004 SNORD116-6-201ENST00000384711 96 ntBASIC3.5□□□□□ -1.85
VTNP04004 MIR3074-201ENST00000384885 81 ntBASIC3.5□□□□□ -1.85
VTNP04004 UBA52P6-201ENST00000399822 382 ntBASIC3.5□□□□□ -1.85
VTNP04004 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.5□□□□□ -1.85
VTNP04004 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.5□□□□□ -1.85
VTNP04004 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.5□□□□□ -1.85
VTNP04004 MTND2P20-201ENST00000440805 661 ntBASIC3.5□□□□□ -1.85
VTNP04004 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.5□□□□□ -1.85
VTNP04004 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.5□□□□□ -1.85
VTNP04004 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.5□□□□□ -1.85
VTNP04004 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.5□□□□□ -1.85
VTNP04004 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.5□□□□□ -1.85
VTNP04004 AC106872.2-201ENST00000494303 480 ntBASIC3.5□□□□□ -1.85
VTNP04004 RPF2P2-201ENST00000504693 896 ntBASIC3.5□□□□□ -1.85
VTNP04004 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.5□□□□□ -1.85
VTNP04004 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.5□□□□□ -1.85
VTNP04004 AC008885.1-201ENST00000514930 301 ntBASIC3.5□□□□□ -1.85
VTNP04004 RNU6-759P-201ENST00000516740 103 ntBASIC3.5□□□□□ -1.85
VTNP04004 MTCO1P47-201ENST00000523889 1271 ntBASIC3.5□□□□□ -1.85
VTNP04004 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.5□□□□□ -1.85
VTNP04004 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.5□□□□□ -1.85
VTNP04004 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.5□□□□□ -1.85
VTNP04004 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.5□□□□□ -1.85
VTNP04004 LARP7P2-201ENST00000575306 125 ntBASIC3.5□□□□□ -1.85
VTNP04004 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.5□□□□□ -1.85
VTNP04004 AC090616.5-202ENST00000582111 297 ntBASIC3.5□□□□□ -1.85
VTNP04004 MAGOH2P-202ENST00000584384 429 ntBASIC3.5□□□□□ -1.85
VTNP04004 BNIP3P24-201ENST00000593398 557 ntBASIC3.5□□□□□ -1.85
VTNP04004 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.5□□□□□ -1.85
VTNP04004 AC004987.4-201ENST00000603383 338 ntBASIC3.5□□□□□ -1.85
VTNP04004 PRELID3BP8-201ENST00000604148 295 ntBASIC3.5□□□□□ -1.85
VTNP04004 AC097065.2-201ENST00000608159 533 ntBASIC3.5□□□□□ -1.85
VTNP04004 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.5□□□□□ -1.85
VTNP04004 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VTNP04004 AL603755.1-201ENST00000619504 163 ntBASIC3.5□□□□□ -1.85
VTNP04004 AC048344.4-201ENST00000619744 527 ntBASIC3.5□□□□□ -1.85
VTNP04004 AC079228.1-201ENST00000624774 1049 ntBASIC3.5□□□□□ -1.85
VTNP04004 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.5□□□□□ -1.85
VTNP04004 AC007671.2-201ENST00000637344 619 ntBASIC3.5□□□□□ -1.85
VTNP04004 AC138649.5-201ENST00000637456 137 ntBASIC3.5□□□□□ -1.85
VTNP04004 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VTNP04004 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.5□□□□□ -1.85
VTNP04004 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.5□□□□□ -1.85
VTNP04004 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.5□□□□□ -1.85
VTNP04004 ZNF807-201ENST00000328088 1707 ntBASIC3.5□□□□□ -1.85
VTNP04004 AC087359.1-201ENST00000508335 1740 ntBASIC3.5□□□□□ -1.85
VTNP04004 ZNF734P-201ENST00000419494 1534 ntBASIC3.49□□□□□ -1.85
VTNP04004 AC010733.2-201ENST00000589496 5702 ntBASIC3.49□□□□□ -1.85
VTNP04004 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.49□□□□□ -1.85
VTNP04004 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
VTNP04004 AC130650.2-201ENST00000618736 2403 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms