Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 OR4R1P-201ENST00000529879 463 ntBASIC2.63□□□□□ -1.99
APOEP02649 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.63□□□□□ -1.99
APOEP02649 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.63□□□□□ -1.99
APOEP02649 AC060766.3-201ENST00000591442 263 ntBASIC2.63□□□□□ -1.99
APOEP02649 NRBF2P5-201ENST00000603087 788 ntBASIC2.63□□□□□ -1.99
APOEP02649 U4.3-201ENST00000621047 82 ntBASIC2.63□□□□□ -1.99
APOEP02649 AL360181.4-201ENST00000621752 134 ntBASIC2.63□□□□□ -1.99
APOEP02649 MAPK10-266ENST00000641066 6555 ntBASIC2.63□□□□□ -1.99
APOEP02649 AC011460.1-201ENST00000636268 1834 ntBASIC2.63□□□□□ -1.99
APOEP02649 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
APOEP02649 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.62□□□□□ -1.99
APOEP02649 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
APOEP02649 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
APOEP02649 SGO1P2-201ENST00000429458 1589 ntBASIC2.62□□□□□ -1.99
APOEP02649 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.62□□□□□ -1.99
APOEP02649 AC093536.2-201ENST00000565257 1406 ntBASIC2.62□□□□□ -1.99
APOEP02649 Y_RNA.500-201ENST00000384466 111 ntBASIC2.62□□□□□ -1.99
APOEP02649 RNU6-272P-201ENST00000411028 104 ntBASIC2.62□□□□□ -1.99
APOEP02649 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.62□□□□□ -1.99
APOEP02649 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
APOEP02649 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.62□□□□□ -1.99
APOEP02649 AC236972.1-201ENST00000433225 199 ntBASIC2.62□□□□□ -1.99
APOEP02649 AC010881.1-201ENST00000433830 235 ntBASIC2.62□□□□□ -1.99
APOEP02649 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.62□□□□□ -1.99
APOEP02649 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.62□□□□□ -1.99
APOEP02649 AC092685.1-201ENST00000447960 1243 ntBASIC2.62□□□□□ -1.99
APOEP02649 RPS3P1-201ENST00000456781 192 ntBASIC2.62□□□□□ -1.99
APOEP02649 AC015724.1-201ENST00000478577 156 ntBASIC2.62□□□□□ -1.99
APOEP02649 AC096751.1-202ENST00000502691 1067 ntBASIC2.62□□□□□ -1.99
APOEP02649 OR5H5P-201ENST00000503164 928 ntBASIC2.62□□□□□ -1.99
APOEP02649 RNA5SP320-201ENST00000516263 124 ntBASIC2.62□□□□□ -1.99
APOEP02649 SNORA31.11-201ENST00000516528 139 ntBASIC2.62□□□□□ -1.99
APOEP02649 CKS1BP7-201ENST00000522230 235 ntBASIC2.62□□□□□ -1.99
APOEP02649 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.62□□□□□ -1.99
APOEP02649 UBTFL10-201ENST00000528532 562 ntBASIC2.62□□□□□ -1.99
APOEP02649 SNRPGP16-201ENST00000533275 226 ntBASIC2.62□□□□□ -1.99
APOEP02649 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.62□□□□□ -1.99
APOEP02649 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.62□□□□□ -1.99
APOEP02649 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.62□□□□□ -1.99
APOEP02649 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
APOEP02649 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.62□□□□□ -1.99
APOEP02649 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.62□□□□□ -1.99
APOEP02649 NUTF2P8-201ENST00000604593 363 ntBASIC2.62□□□□□ -1.99
APOEP02649 CR589904.2-201ENST00000612533 440 ntBASIC2.62□□□□□ -1.99
APOEP02649 AC090116.1-201ENST00000615679 446 ntBASIC2.62□□□□□ -1.99
APOEP02649 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.62□□□□□ -1.99
APOEP02649 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
APOEP02649 AL109659.3-201ENST00000624985 950 ntBASIC2.62□□□□□ -1.99
APOEP02649 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
APOEP02649 BX649567.1-201ENST00000642071 1134 ntBASIC2.62□□□□□ -1.99
APOEP02649 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
APOEP02649 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.61□□□□□ -1.99
APOEP02649 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
APOEP02649 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
APOEP02649 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
APOEP02649 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.61□□□□□ -1.99
APOEP02649 FNDC3CP-201ENST00000420795 1155 ntBASIC2.61□□□□□ -1.99
APOEP02649 CR769767.1-201ENST00000436337 346 ntBASIC2.61□□□□□ -1.99
APOEP02649 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.61□□□□□ -1.99
APOEP02649 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.61□□□□□ -1.99
APOEP02649 AL513321.1-201ENST00000441175 761 ntBASIC2.61□□□□□ -1.99
APOEP02649 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.61□□□□□ -1.99
APOEP02649 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.61□□□□□ -1.99
APOEP02649 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.61□□□□□ -1.99
APOEP02649 AC104389.3-201ENST00000445629 235 ntBASIC2.61□□□□□ -1.99
APOEP02649 AL034418.1-201ENST00000448675 860 ntBASIC2.61□□□□□ -1.99
APOEP02649 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.61□□□□□ -1.99
APOEP02649 RPS27P27-201ENST00000498779 255 ntBASIC2.61□□□□□ -1.99
APOEP02649 SNORA31.8-201ENST00000516327 108 ntBASIC2.61□□□□□ -1.99
APOEP02649 RNA5SP82-201ENST00000516707 92 ntBASIC2.61□□□□□ -1.99
APOEP02649 AC026241.1-201ENST00000517873 2142 ntBASIC2.61□□□□□ -1.99
APOEP02649 AC126177.3-201ENST00000551839 688 ntBASIC2.61□□□□□ -1.99
APOEP02649 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.61□□□□□ -1.99
APOEP02649 AC007621.1-201ENST00000604544 437 ntBASIC2.61□□□□□ -1.99
APOEP02649 AC106900.2-201ENST00000604994 317 ntBASIC2.61□□□□□ -1.99
APOEP02649 AL161734.1-201ENST00000609720 557 ntBASIC2.61□□□□□ -1.99
APOEP02649 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.61□□□□□ -1.99
APOEP02649 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.6□□□□□ -1.99
APOEP02649 MIR6073-201ENST00000352083 89 ntBASIC2.6□□□□□ -1.99
APOEP02649 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
APOEP02649 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
APOEP02649 SNORA51.12-201ENST00000384448 134 ntBASIC2.6□□□□□ -1.99
APOEP02649 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.6□□□□□ -1.99
APOEP02649 AC092447.6-201ENST00000414578 210 ntBASIC2.6□□□□□ -1.99
APOEP02649 RPL21P32-201ENST00000419877 477 ntBASIC2.6□□□□□ -1.99
APOEP02649 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.6□□□□□ -1.99
APOEP02649 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.6□□□□□ -1.99
APOEP02649 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.6□□□□□ -1.99
APOEP02649 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.6□□□□□ -1.99
APOEP02649 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.6□□□□□ -1.99
APOEP02649 AC133134.1-201ENST00000466800 359 ntBASIC2.6□□□□□ -1.99
APOEP02649 RPL23AP45-201ENST00000476406 468 ntBASIC2.6□□□□□ -1.99
APOEP02649 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.6□□□□□ -1.99
APOEP02649 AC108157.1-201ENST00000510511 539 ntBASIC2.6□□□□□ -1.99
APOEP02649 AC008716.1-201ENST00000511084 513 ntBASIC2.6□□□□□ -1.99
APOEP02649 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.6□□□□□ -1.99
APOEP02649 RN7SKP40-201ENST00000517211 242 ntBASIC2.6□□□□□ -1.99
APOEP02649 RNU1-104P-201ENST00000517280 175 ntBASIC2.6□□□□□ -1.99
APOEP02649 RPL23AP84-201ENST00000571193 464 ntBASIC2.6□□□□□ -1.99
APOEP02649 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms