Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.49□□□□□ -2.01
COL1A1P02452 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.49□□□□□ -2.01
COL1A1P02452 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.49□□□□□ -2.01
COL1A1P02452 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
COL1A1P02452 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL1A1P02452 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
COL1A1P02452 RNU1-17P-201ENST00000363022 152 ntBASIC2.48□□□□□ -2.01
COL1A1P02452 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.48□□□□□ -2.01
COL1A1P02452 MIR583-201ENST00000384846 75 ntBASIC2.48□□□□□ -2.01
COL1A1P02452 MIR518E-201ENST00000385252 88 ntBASIC2.48□□□□□ -2.01
COL1A1P02452 MIR320B1-201ENST00000390209 79 ntBASIC2.48□□□□□ -2.01
COL1A1P02452 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL1A1P02452 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
COL1A1P02452 AL445669.2-201ENST00000454425 421 ntBASIC2.48□□□□□ -2.01
COL1A1P02452 RPL7P5-201ENST00000471472 736 ntBASIC2.48□□□□□ -2.01
COL1A1P02452 OR52A4P-203ENST00000498233 1014 ntBASIC2.48□□□□□ -2.01
COL1A1P02452 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.48□□□□□ -2.01
COL1A1P02452 HMGB3P15-201ENST00000507326 574 ntBASIC2.48□□□□□ -2.01
COL1A1P02452 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.48□□□□□ -2.01
COL1A1P02452 MTND5P4-201ENST00000514978 288 ntBASIC2.48□□□□□ -2.01
COL1A1P02452 AC068339.2-201ENST00000534395 618 ntBASIC2.48□□□□□ -2.01
COL1A1P02452 OR6C73P-201ENST00000546432 358 ntBASIC2.48□□□□□ -2.01
COL1A1P02452 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.48□□□□□ -2.01
COL1A1P02452 SNRPGP19-201ENST00000603826 189 ntBASIC2.48□□□□□ -2.01
COL1A1P02452 snoU13.31-201ENST00000607291 104 ntBASIC2.48□□□□□ -2.01
COL1A1P02452 AC006065.5-201ENST00000623427 349 ntBASIC2.48□□□□□ -2.01
COL1A1P02452 AC092159.4-201ENST00000624944 550 ntBASIC2.48□□□□□ -2.01
COL1A1P02452 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.48□□□□□ -2.01
COL1A1P02452 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
COL1A1P02452 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.48□□□□□ -2.01
COL1A1P02452 MTND5P28-201ENST00000438005 1594 ntBASIC2.48□□□□□ -2.01
COL1A1P02452 AL359893.1-201ENST00000447628 1580 ntBASIC2.48□□□□□ -2.01
COL1A1P02452 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.47□□□□□ -2.01
COL1A1P02452 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
COL1A1P02452 RNU6-356P-201ENST00000384140 107 ntBASIC2.47□□□□□ -2.01
COL1A1P02452 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.47□□□□□ -2.01
COL1A1P02452 AC104332.2-201ENST00000429959 156 ntBASIC2.47□□□□□ -2.01
COL1A1P02452 RPL7P54-201ENST00000438336 674 ntBASIC2.47□□□□□ -2.01
COL1A1P02452 AC009237.8-201ENST00000445492 379 ntBASIC2.47□□□□□ -2.01
COL1A1P02452 PTGES3P5-201ENST00000455109 434 ntBASIC2.47□□□□□ -2.01
COL1A1P02452 RNU7-27P-201ENST00000459281 62 ntBASIC2.47□□□□□ -2.01
COL1A1P02452 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
COL1A1P02452 FAM92A1P2-202ENST00000504766 877 ntBASIC2.47□□□□□ -2.01
COL1A1P02452 AC090071.1-201ENST00000507713 644 ntBASIC2.47□□□□□ -2.01
COL1A1P02452 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
COL1A1P02452 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.47□□□□□ -2.01
COL1A1P02452 NDUFA5P6-201ENST00000542110 379 ntBASIC2.47□□□□□ -2.01
COL1A1P02452 AMZ2P1-203ENST00000565833 850 ntBASIC2.47□□□□□ -2.01
COL1A1P02452 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.47□□□□□ -2.01
COL1A1P02452 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.47□□□□□ -2.01
COL1A1P02452 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
COL1A1P02452 ZNF720P1-201ENST00000562403 1939 ntBASIC2.47□□□□□ -2.01
COL1A1P02452 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
COL1A1P02452 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
COL1A1P02452 AC240504.1-201ENST00000395709 845 ntBASIC2.46□□□□□ -2.02
COL1A1P02452 XKRYP4-201ENST00000414395 483 ntBASIC2.46□□□□□ -2.02
COL1A1P02452 AC129850.1-201ENST00000436203 508 ntBASIC2.46□□□□□ -2.02
COL1A1P02452 AC003989.2-201ENST00000440224 169 ntBASIC2.46□□□□□ -2.02
COL1A1P02452 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.46□□□□□ -2.02
COL1A1P02452 XKRYP5-201ENST00000449659 483 ntBASIC2.46□□□□□ -2.02
COL1A1P02452 ARPC3P2-201ENST00000457786 533 ntBASIC2.46□□□□□ -2.02
COL1A1P02452 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.46□□□□□ -2.02
COL1A1P02452 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.46□□□□□ -2.02
COL1A1P02452 RPL30P11-201ENST00000495304 339 ntBASIC2.46□□□□□ -2.02
COL1A1P02452 GZMAP1-201ENST00000503054 631 ntBASIC2.46□□□□□ -2.02
COL1A1P02452 AC091917.2-201ENST00000505002 744 ntBASIC2.46□□□□□ -2.02
COL1A1P02452 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.46□□□□□ -2.02
COL1A1P02452 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.46□□□□□ -2.02
COL1A1P02452 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.46□□□□□ -2.02
COL1A1P02452 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.46□□□□□ -2.02
COL1A1P02452 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.46□□□□□ -2.02
COL1A1P02452 AL110115.1-201ENST00000614396 364 ntBASIC2.46□□□□□ -2.02
COL1A1P02452 RPL23AP61-201ENST00000623642 466 ntBASIC2.46□□□□□ -2.02
COL1A1P02452 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.46□□□□□ -2.02
COL1A1P02452 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
COL1A1P02452 AL355578.1-201ENST00000607405 1328 ntBASIC2.46□□□□□ -2.02
COL1A1P02452 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
COL1A1P02452 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL1A1P02452 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL1A1P02452 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
COL1A1P02452 RNU6-532P-201ENST00000384318 107 ntBASIC2.45□□□□□ -2.02
COL1A1P02452 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.45□□□□□ -2.02
COL1A1P02452 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.45□□□□□ -2.02
COL1A1P02452 NDUFA5P4-201ENST00000436704 385 ntBASIC2.45□□□□□ -2.02
COL1A1P02452 snoU13.18-201ENST00000459483 104 ntBASIC2.45□□□□□ -2.02
COL1A1P02452 AC012181.1-201ENST00000479895 423 ntBASIC2.45□□□□□ -2.02
COL1A1P02452 AC010265.1-201ENST00000513509 211 ntBASIC2.45□□□□□ -2.02
COL1A1P02452 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
COL1A1P02452 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.45□□□□□ -2.02
COL1A1P02452 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.45□□□□□ -2.02
COL1A1P02452 AC005951.1-201ENST00000576706 485 ntBASIC2.45□□□□□ -2.02
COL1A1P02452 AL161912.3-201ENST00000605404 628 ntBASIC2.45□□□□□ -2.02
COL1A1P02452 AC120053.1-201ENST00000607706 736 ntBASIC2.45□□□□□ -2.02
COL1A1P02452 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
COL1A1P02452 AC022079.2-201ENST00000619739 566 ntBASIC2.45□□□□□ -2.02
COL1A1P02452 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
COL1A1P02452 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
COL1A1P02452 MTND2P16-201ENST00000419987 799 ntBASIC2.45□□□□□ -2.02
COL1A1P02452 AL353729.1-201ENST00000425044 720 ntBASIC2.45□□□□□ -2.02
COL1A1P02452 AC108667.1-201ENST00000428618 249 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms