Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GFRA3O60609 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
GFRA3O60609 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
GFRA3O60609 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA3O60609 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
GFRA3O60609 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA3O60609 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
GFRA3O60609 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.79□□□□□ -1.48
GFRA3O60609 AC011455.2-201ENST00000599320 3336 ntBASIC5.79□□□□□ -1.48
GFRA3O60609 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA3O60609 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
GFRA3O60609 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA3O60609 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC5.79□□□□□ -1.48
GFRA3O60609 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA3O60609 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA3O60609 AC024587.1-201ENST00000505925 2157 ntBASIC5.79□□□□□ -1.48
GFRA3O60609 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
GFRA3O60609 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.79□□□□□ -1.48
GFRA3O60609 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
GFRA3O60609 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
GFRA3O60609 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
GFRA3O60609 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA3O60609 RNU105B-201ENST00000364478 208 ntBASIC5.79□□□□□ -1.48
GFRA3O60609 RNU6-1131P-201ENST00000364955 107 ntBASIC5.79□□□□□ -1.48
GFRA3O60609 RNU6-460P-201ENST00000391158 108 ntBASIC5.79□□□□□ -1.48
GFRA3O60609 DUTP5-201ENST00000406790 469 ntBASIC5.79□□□□□ -1.48
GFRA3O60609 RNU5A-5P-201ENST00000411054 116 ntBASIC5.79□□□□□ -1.48
GFRA3O60609 CYCSP52-201ENST00000422857 310 ntBASIC5.79□□□□□ -1.48
GFRA3O60609 RPS26P40-201ENST00000435209 294 ntBASIC5.79□□□□□ -1.48
GFRA3O60609 AC008264.1-201ENST00000447612 367 ntBASIC5.79□□□□□ -1.48
GFRA3O60609 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.79□□□□□ -1.48
GFRA3O60609 AC092991.1-201ENST00000477176 376 ntBASIC5.79□□□□□ -1.48
GFRA3O60609 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.79□□□□□ -1.48
GFRA3O60609 AC095057.1-201ENST00000507583 168 ntBASIC5.79□□□□□ -1.48
GFRA3O60609 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.79□□□□□ -1.48
GFRA3O60609 IGLV3-30-201ENST00000524362 298 ntBASIC5.79□□□□□ -1.48
GFRA3O60609 AC009120.3-201ENST00000563335 499 ntBASIC5.79□□□□□ -1.48
GFRA3O60609 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.79□□□□□ -1.48
GFRA3O60609 AC000123.2-201ENST00000623124 461 ntBASIC5.79□□□□□ -1.48
GFRA3O60609 snoU18.1-201ENST00000629629 71 ntBASIC5.79□□□□□ -1.48
GFRA3O60609 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA3O60609 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA3O60609 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC5.79□□□□□ -1.48
GFRA3O60609 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.79□□□□□ -1.48
GFRA3O60609 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.79□□□□□ -1.48
GFRA3O60609 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
GFRA3O60609 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
GFRA3O60609 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA3O60609 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
GFRA3O60609 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
GFRA3O60609 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
GFRA3O60609 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA3O60609 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.79□□□□□ -1.48
GFRA3O60609 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.79□□□□□ -1.48
GFRA3O60609 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.79□□□□□ -1.48
GFRA3O60609 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA3O60609 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
GFRA3O60609 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA3O60609 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA3O60609 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA3O60609 AC062022.1-201ENST00000451026 1684 ntBASIC5.79□□□□□ -1.48
GFRA3O60609 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA3O60609 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.78□□□□□ -1.48
GFRA3O60609 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA3O60609 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
GFRA3O60609 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
GFRA3O60609 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA3O60609 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA3O60609 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC5.78□□□□□ -1.48
GFRA3O60609 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA3O60609 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA3O60609 Y_RNA.348-201ENST00000365403 103 ntBASIC5.78□□□□□ -1.48
GFRA3O60609 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA3O60609 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.78□□□□□ -1.48
GFRA3O60609 Y_RNA.405-201ENST00000383979 100 ntBASIC5.78□□□□□ -1.48
GFRA3O60609 Y_RNA.451-201ENST00000384200 100 ntBASIC5.78□□□□□ -1.48
GFRA3O60609 Y_RNA.524-201ENST00000384564 100 ntBASIC5.78□□□□□ -1.48
GFRA3O60609 Y_RNA.561-201ENST00000384694 100 ntBASIC5.78□□□□□ -1.48
GFRA3O60609 RNU6-21P-201ENST00000384710 107 ntBASIC5.78□□□□□ -1.48
GFRA3O60609 AL034374.1-201ENST00000406329 351 ntBASIC5.78□□□□□ -1.48
GFRA3O60609 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA3O60609 PARP4P1-201ENST00000435945 2337 ntBASIC5.78□□□□□ -1.48
GFRA3O60609 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA3O60609 MRPS10P1-201ENST00000448483 130 ntBASIC5.78□□□□□ -1.48
GFRA3O60609 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.78□□□□□ -1.48
GFRA3O60609 RN7SKP210-201ENST00000459176 261 ntBASIC5.78□□□□□ -1.48
GFRA3O60609 RNU7-27P-201ENST00000459281 62 ntBASIC5.78□□□□□ -1.48
GFRA3O60609 AC008897.1-201ENST00000494006 347 ntBASIC5.78□□□□□ -1.48
GFRA3O60609 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.78□□□□□ -1.48
GFRA3O60609 RNU7-110P-201ENST00000516891 62 ntBASIC5.78□□□□□ -1.48
GFRA3O60609 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.78□□□□□ -1.48
GFRA3O60609 MIR4260-201ENST00000583107 67 ntBASIC5.78□□□□□ -1.48
GFRA3O60609 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.78□□□□□ -1.48
GFRA3O60609 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.78□□□□□ -1.48
GFRA3O60609 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
GFRA3O60609 AL589994.2-201ENST00000621124 579 ntBASIC5.78□□□□□ -1.48
GFRA3O60609 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA3O60609 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
GFRA3O60609 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA3O60609 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms