Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.37□□□□□ -1.55
SMARCA5O60264 Y_RNA.704-201ENST00000516851 102 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 AC100770.1-201ENST00000532310 322 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.37□□□□□ -1.55
SMARCA5O60264 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.37□□□□□ -1.55
SMARCA5O60264 HMGB1P33-201ENST00000563485 527 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 AC034268.2-201ENST00000571784 482 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 AC137800.2-201ENST00000574375 120 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.37□□□□□ -1.55
SMARCA5O60264 RN7SL176P-201ENST00000580352 264 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 AC022916.3-201ENST00000592961 742 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 AC008277.2-201ENST00000605196 797 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 AC090948.1-201ENST00000607464 549 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 MLECP1-201ENST00000615893 709 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 AC009159.1-201ENST00000618386 642 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 AC009268.2-201ENST00000621925 457 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SMARCA5O60264 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.37□□□□□ -1.55
SMARCA5O60264 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.37□□□□□ -1.55
SMARCA5O60264 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMARCA5O60264 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SMARCA5O60264 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC5.37□□□□□ -1.55
SMARCA5O60264 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMARCA5O60264 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.37□□□□□ -1.55
SMARCA5O60264 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SMARCA5O60264 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SMARCA5O60264 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SMARCA5O60264 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMARCA5O60264 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
SMARCA5O60264 Y_RNA.263-201ENST00000364659 114 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 GSTA9P-201ENST00000406231 611 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 Y_RNA.598-201ENST00000410480 95 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 ELOCP19-201ENST00000411919 318 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.36□□□□□ -1.55
SMARCA5O60264 C1DP2-201ENST00000418167 426 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.36□□□□□ -1.55
SMARCA5O60264 AC068287.1-201ENST00000430283 295 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 AL358934.1-201ENST00000432346 324 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 PHBP16-201ENST00000446318 950 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 AC010655.1-201ENST00000449336 292 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 USP9YP12-201ENST00000450481 570 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.36□□□□□ -1.55
SMARCA5O60264 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.36□□□□□ -1.55
SMARCA5O60264 RPL23AP41-201ENST00000484754 458 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.36□□□□□ -1.55
SMARCA5O60264 Y_RNA.701-201ENST00000516812 110 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 CDH12P4-201ENST00000517835 295 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 CDH12P3-201ENST00000517935 295 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 CDH12P1-201ENST00000518435 295 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 AP001893.2-201ENST00000526949 202 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.36□□□□□ -1.55
SMARCA5O60264 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.36□□□□□ -1.55
SMARCA5O60264 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.36□□□□□ -1.55
SMARCA5O60264 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.36□□□□□ -1.55
SMARCA5O60264 MIR6820-201ENST00000611508 62 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.36□□□□□ -1.55
SMARCA5O60264 AL713922.2-201ENST00000619384 716 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 AL445363.3-201ENST00000623080 671 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.36□□□□□ -1.55
SMARCA5O60264 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.36□□□□□ -1.55
SMARCA5O60264 MIR4275-201ENST00000636486 87 ntBASIC5.36□□□□□ -1.55
SMARCA5O60264 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMARCA5O60264 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.36□□□□□ -1.55
SMARCA5O60264 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMARCA5O60264 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMARCA5O60264 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.36□□□□□ -1.55
SMARCA5O60264 AC018529.3-201ENST00000624212 2254 ntBASIC5.35□□□□□ -1.55
SMARCA5O60264 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMARCA5O60264 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMARCA5O60264 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMARCA5O60264 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.35□□□□□ -1.55
SMARCA5O60264 AC126755.2-208ENST00000327792 462 ntBASIC5.35□□□□□ -1.55
SMARCA5O60264 AC138969.1-213ENST00000331436 462 ntBASIC5.35□□□□□ -1.55
SMARCA5O60264 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.35□□□□□ -1.55
SMARCA5O60264 RNU6-1078P-201ENST00000364522 103 ntBASIC5.35□□□□□ -1.55
SMARCA5O60264 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
SMARCA5O60264 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SMARCA5O60264 Y_RNA.409-201ENST00000383990 98 ntBASIC5.35□□□□□ -1.55
SMARCA5O60264 AL356776.1-201ENST00000406574 447 ntBASIC5.35□□□□□ -1.55
SMARCA5O60264 RN7SKP235-201ENST00000410662 305 ntBASIC5.35□□□□□ -1.55
SMARCA5O60264 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.35□□□□□ -1.55
SMARCA5O60264 USP9YP20-201ENST00000419224 558 ntBASIC5.35□□□□□ -1.55
SMARCA5O60264 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.35□□□□□ -1.55
SMARCA5O60264 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.35□□□□□ -1.55
SMARCA5O60264 MTCO1P20-201ENST00000425366 358 ntBASIC5.35□□□□□ -1.55
SMARCA5O60264 PGBD4P3-201ENST00000440731 581 ntBASIC5.35□□□□□ -1.55
SMARCA5O60264 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC5.35□□□□□ -1.55
SMARCA5O60264 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.35□□□□□ -1.55
SMARCA5O60264 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.35□□□□□ -1.55
SMARCA5O60264 RPL21P104-201ENST00000464143 478 ntBASIC5.35□□□□□ -1.55
SMARCA5O60264 RPL23AP65-201ENST00000475608 468 ntBASIC5.35□□□□□ -1.55
SMARCA5O60264 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.35□□□□□ -1.55
SMARCA5O60264 AC112204.1-201ENST00000502591 103 ntBASIC5.35□□□□□ -1.55
SMARCA5O60264 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.35□□□□□ -1.55
SMARCA5O60264 HMGN1P28-201ENST00000521340 364 ntBASIC5.35□□□□□ -1.55
SMARCA5O60264 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.35□□□□□ -1.55
SMARCA5O60264 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.35□□□□□ -1.55
SMARCA5O60264 AL352979.3-201ENST00000553515 247 ntBASIC5.35□□□□□ -1.55
SMARCA5O60264 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.35□□□□□ -1.55
SMARCA5O60264 MTCO3P13-201ENST00000577757 781 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms