Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU6-348P-201ENST00000384386 107 ntBASIC3.45□□□□□ -1.86
PRKNO60260 RNU6-878P-201ENST00000384578 110 ntBASIC3.45□□□□□ -1.86
PRKNO60260 SNORA40.3-201ENST00000390964 122 ntBASIC3.45□□□□□ -1.86
PRKNO60260 PTMAP2-201ENST00000397627 327 ntBASIC3.45□□□□□ -1.86
PRKNO60260 RNA5SP104-201ENST00000410989 118 ntBASIC3.45□□□□□ -1.86
PRKNO60260 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.45□□□□□ -1.86
PRKNO60260 HMGN1P14-201ENST00000412459 517 ntBASIC3.45□□□□□ -1.86
PRKNO60260 SYF2P2-201ENST00000417620 583 ntBASIC3.45□□□□□ -1.86
PRKNO60260 AL035423.1-201ENST00000420331 213 ntBASIC3.45□□□□□ -1.86
PRKNO60260 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.45□□□□□ -1.86
PRKNO60260 AL513174.1-201ENST00000423182 629 ntBASIC3.45□□□□□ -1.86
PRKNO60260 FTH1P6-201ENST00000430768 320 ntBASIC3.45□□□□□ -1.86
PRKNO60260 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.45□□□□□ -1.86
PRKNO60260 AC109583.1-201ENST00000432156 268 ntBASIC3.45□□□□□ -1.86
PRKNO60260 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.45□□□□□ -1.86
PRKNO60260 USP9YP28-201ENST00000435142 589 ntBASIC3.45□□□□□ -1.86
PRKNO60260 MTCYBP45-201ENST00000435243 565 ntBASIC3.45□□□□□ -1.86
PRKNO60260 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.45□□□□□ -1.86
PRKNO60260 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.45□□□□□ -1.86
PRKNO60260 AC092641.1-201ENST00000440229 772 ntBASIC3.45□□□□□ -1.86
PRKNO60260 RPL7P36-201ENST00000444633 681 ntBASIC3.45□□□□□ -1.86
PRKNO60260 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.45□□□□□ -1.86
PRKNO60260 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.45□□□□□ -1.86
PRKNO60260 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.45□□□□□ -1.86
PRKNO60260 AL590365.1-201ENST00000450788 243 ntBASIC3.45□□□□□ -1.86
PRKNO60260 MTND1P27-201ENST00000451117 902 ntBASIC3.45□□□□□ -1.86
PRKNO60260 SUMO2P2-201ENST00000456482 255 ntBASIC3.45□□□□□ -1.86
PRKNO60260 MTCO1P42-201ENST00000457379 726 ntBASIC3.45□□□□□ -1.86
PRKNO60260 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.45□□□□□ -1.86
PRKNO60260 AC104563.1-201ENST00000476147 376 ntBASIC3.45□□□□□ -1.86
PRKNO60260 RPL21P103-201ENST00000479921 488 ntBASIC3.45□□□□□ -1.86
PRKNO60260 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.45□□□□□ -1.86
PRKNO60260 MTCO3P44-201ENST00000510977 541 ntBASIC3.45□□□□□ -1.86
PRKNO60260 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.45□□□□□ -1.86
PRKNO60260 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.45□□□□□ -1.86
PRKNO60260 RNU6-405P-201ENST00000516637 110 ntBASIC3.45□□□□□ -1.86
PRKNO60260 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.45□□□□□ -1.86
PRKNO60260 AP003392.2-201ENST00000527269 208 ntBASIC3.45□□□□□ -1.86
PRKNO60260 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.45□□□□□ -1.86
PRKNO60260 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.45□□□□□ -1.86
PRKNO60260 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.45□□□□□ -1.86
PRKNO60260 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.45□□□□□ -1.86
PRKNO60260 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.45□□□□□ -1.86
PRKNO60260 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.45□□□□□ -1.86
PRKNO60260 AC091965.4-201ENST00000607691 587 ntBASIC3.45□□□□□ -1.86
PRKNO60260 AC006566.1-201ENST00000608943 513 ntBASIC3.45□□□□□ -1.86
PRKNO60260 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.45□□□□□ -1.86
PRKNO60260 Z99129.1-201ENST00000612510 255 ntBASIC3.45□□□□□ -1.86
PRKNO60260 AC091905.1-201ENST00000624400 311 ntBASIC3.45□□□□□ -1.86
PRKNO60260 SAGE4P-201ENST00000442271 3381 ntBASIC3.45□□□□□ -1.86
PRKNO60260 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
PRKNO60260 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRKNO60260 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRKNO60260 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.45□□□□□ -1.86
PRKNO60260 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
PRKNO60260 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PRKNO60260 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.45□□□□□ -1.86
PRKNO60260 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRKNO60260 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRKNO60260 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRKNO60260 NUP58P1-201ENST00000502546 1738 ntBASIC3.44□□□□□ -1.86
PRKNO60260 MTND5P29-201ENST00000458676 1807 ntBASIC3.44□□□□□ -1.86
PRKNO60260 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PRKNO60260 BDP1P-201ENST00000582658 1990 ntBASIC3.44□□□□□ -1.86
PRKNO60260 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRKNO60260 AL359893.1-201ENST00000447628 1580 ntBASIC3.44□□□□□ -1.86
PRKNO60260 AC007656.2-201ENST00000624902 4547 ntBASIC3.44□□□□□ -1.86
PRKNO60260 U3.15-201ENST00000365398 212 ntBASIC3.44□□□□□ -1.86
PRKNO60260 MIR124-3-201ENST00000384866 87 ntBASIC3.44□□□□□ -1.86
PRKNO60260 HLFP1-201ENST00000402375 499 ntBASIC3.44□□□□□ -1.86
PRKNO60260 MTND4LP20-201ENST00000402379 270 ntBASIC3.44□□□□□ -1.86
PRKNO60260 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.44□□□□□ -1.86
PRKNO60260 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.44□□□□□ -1.86
PRKNO60260 AC007742.1-201ENST00000425789 329 ntBASIC3.44□□□□□ -1.86
PRKNO60260 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.44□□□□□ -1.86
PRKNO60260 ELOCP26-201ENST00000436067 329 ntBASIC3.44□□□□□ -1.86
PRKNO60260 RPL7P28-201ENST00000437739 740 ntBASIC3.44□□□□□ -1.86
PRKNO60260 SDCBPP1-201ENST00000440192 890 ntBASIC3.44□□□□□ -1.86
PRKNO60260 AL031667.1-201ENST00000440222 725 ntBASIC3.44□□□□□ -1.86
PRKNO60260 AL022238.1-201ENST00000442557 355 ntBASIC3.44□□□□□ -1.86
PRKNO60260 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRKNO60260 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.44□□□□□ -1.86
PRKNO60260 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.44□□□□□ -1.86
PRKNO60260 HMGB1P15-201ENST00000453854 435 ntBASIC3.44□□□□□ -1.86
PRKNO60260 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.44□□□□□ -1.86
PRKNO60260 SNORD108-201ENST00000459332 71 ntBASIC3.44□□□□□ -1.86
PRKNO60260 AC011825.1-201ENST00000484967 388 ntBASIC3.44□□□□□ -1.86
PRKNO60260 AP001025.2-201ENST00000490908 477 ntBASIC3.44□□□□□ -1.86
PRKNO60260 RPL21P129-201ENST00000491732 478 ntBASIC3.44□□□□□ -1.86
PRKNO60260 AC023424.2-201ENST00000493479 777 ntBASIC3.44□□□□□ -1.86
PRKNO60260 AC012170.1-201ENST00000495139 359 ntBASIC3.44□□□□□ -1.86
PRKNO60260 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.44□□□□□ -1.86
PRKNO60260 CDC42P4-201ENST00000510507 563 ntBASIC3.44□□□□□ -1.86
PRKNO60260 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.44□□□□□ -1.86
PRKNO60260 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.44□□□□□ -1.86
PRKNO60260 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.44□□□□□ -1.86
PRKNO60260 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.44□□□□□ -1.86
PRKNO60260 SUMO2P20-201ENST00000520803 283 ntBASIC3.44□□□□□ -1.86
PRKNO60260 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.44□□□□□ -1.86
PRKNO60260 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms