Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SSX4O60224 AC110760.3-201ENST00000598794 467 ntBASIC3.49□□□□□ -1.85
SSX4O60224 AC010620.1-201ENST00000601088 1102 ntBASIC3.49□□□□□ -1.85
SSX4O60224 AL022161.1-201ENST00000604390 213 ntBASIC3.49□□□□□ -1.85
SSX4O60224 AC105129.3-201ENST00000605455 485 ntBASIC3.49□□□□□ -1.85
SSX4O60224 AL451086.1-201ENST00000605596 223 ntBASIC3.49□□□□□ -1.85
SSX4O60224 AC092354.1-201ENST00000606057 376 ntBASIC3.49□□□□□ -1.85
SSX4O60224 OR2AS2P-201ENST00000606902 342 ntBASIC3.49□□□□□ -1.85
SSX4O60224 AC097065.2-201ENST00000608159 533 ntBASIC3.49□□□□□ -1.85
SSX4O60224 TUG1_1.1-201ENST00000610654 145 ntBASIC3.49□□□□□ -1.85
SSX4O60224 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.49□□□□□ -1.85
SSX4O60224 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.49□□□□□ -1.85
SSX4O60224 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSX4O60224 AC012321.1-201ENST00000561622 1588 ntBASIC3.49□□□□□ -1.85
SSX4O60224 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSX4O60224 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SSX4O60224 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SSX4O60224 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSX4O60224 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SSX4O60224 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSX4O60224 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSX4O60224 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
SSX4O60224 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.48□□□□□ -1.85
SSX4O60224 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSX4O60224 AC073073.2-201ENST00000609827 2578 ntBASIC3.48□□□□□ -1.85
SSX4O60224 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSX4O60224 RNU5F-6P-201ENST00000362979 116 ntBASIC3.48□□□□□ -1.85
SSX4O60224 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSX4O60224 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SSX4O60224 MTCYBP36-201ENST00000404146 440 ntBASIC3.48□□□□□ -1.85
SSX4O60224 MIR1302-8-201ENST00000408342 128 ntBASIC3.48□□□□□ -1.85
SSX4O60224 NPM1P11-201ENST00000417106 855 ntBASIC3.48□□□□□ -1.85
SSX4O60224 SSXP9-201ENST00000417503 292 ntBASIC3.48□□□□□ -1.85
SSX4O60224 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSX4O60224 RPL21P66-201ENST00000426566 466 ntBASIC3.48□□□□□ -1.85
SSX4O60224 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX4O60224 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.48□□□□□ -1.85
SSX4O60224 RPL37P21-201ENST00000435890 276 ntBASIC3.48□□□□□ -1.85
SSX4O60224 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX4O60224 AC108734.1-201ENST00000439549 399 ntBASIC3.48□□□□□ -1.85
SSX4O60224 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX4O60224 AC112653.1-201ENST00000443851 386 ntBASIC3.48□□□□□ -1.85
SSX4O60224 GDI2P2-201ENST00000445131 608 ntBASIC3.48□□□□□ -1.85
SSX4O60224 AC010655.1-201ENST00000449336 292 ntBASIC3.48□□□□□ -1.85
SSX4O60224 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.48□□□□□ -1.85
SSX4O60224 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.48□□□□□ -1.85
SSX4O60224 AC010468.1-201ENST00000461022 817 ntBASIC3.48□□□□□ -1.85
SSX4O60224 RPL7L1P8-201ENST00000469911 741 ntBASIC3.48□□□□□ -1.85
SSX4O60224 AL024509.2-201ENST00000493462 493 ntBASIC3.48□□□□□ -1.85
SSX4O60224 RPL7P47-201ENST00000497299 556 ntBASIC3.48□□□□□ -1.85
SSX4O60224 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.48□□□□□ -1.85
SSX4O60224 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX4O60224 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.48□□□□□ -1.85
SSX4O60224 AC116347.2-201ENST00000514912 523 ntBASIC3.48□□□□□ -1.85
SSX4O60224 NDUFA5P2-201ENST00000519723 344 ntBASIC3.48□□□□□ -1.85
SSX4O60224 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX4O60224 AL356057.1-201ENST00000533798 831 ntBASIC3.48□□□□□ -1.85
SSX4O60224 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX4O60224 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX4O60224 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSX4O60224 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX4O60224 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX4O60224 AC091489.2-201ENST00000566263 604 ntBASIC3.48□□□□□ -1.85
SSX4O60224 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.48□□□□□ -1.85
SSX4O60224 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.48□□□□□ -1.85
SSX4O60224 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.48□□□□□ -1.85
SSX4O60224 SNORD84-203ENST00000584275 78 ntBASIC3.48□□□□□ -1.85
SSX4O60224 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSX4O60224 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.48□□□□□ -1.85
SSX4O60224 AC006254.3-201ENST00000603353 884 ntBASIC3.48□□□□□ -1.85
SSX4O60224 Z94722.1-201ENST00000604328 474 ntBASIC3.48□□□□□ -1.85
SSX4O60224 AL031775.1-201ENST00000607014 887 ntBASIC3.48□□□□□ -1.85
SSX4O60224 AC091965.4-201ENST00000607691 587 ntBASIC3.48□□□□□ -1.85
SSX4O60224 AL592295.2-201ENST00000612578 206 ntBASIC3.48□□□□□ -1.85
SSX4O60224 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.48□□□□□ -1.85
SSX4O60224 CR392039.5-201ENST00000623201 510 ntBASIC3.48□□□□□ -1.85
SSX4O60224 AC091965.5-201ENST00000624785 342 ntBASIC3.48□□□□□ -1.85
SSX4O60224 AP005264.7-201ENST00000625003 745 ntBASIC3.48□□□□□ -1.85
SSX4O60224 U6.98-201ENST00000637157 84 ntBASIC3.48□□□□□ -1.85
SSX4O60224 CCT4P2-201ENST00000233836 1548 ntBASIC3.48□□□□□ -1.85
SSX4O60224 RIOK3P1-201ENST00000418778 1528 ntBASIC3.48□□□□□ -1.85
SSX4O60224 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.48□□□□□ -1.85
SSX4O60224 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
SSX4O60224 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SSX4O60224 RNU5F-7P-201ENST00000363696 115 ntBASIC3.47□□□□□ -1.85
SSX4O60224 SNORA51.2-201ENST00000364595 132 ntBASIC3.47□□□□□ -1.85
SSX4O60224 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.47□□□□□ -1.85
SSX4O60224 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
SSX4O60224 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SSX4O60224 RNU6-114P-201ENST00000384704 105 ntBASIC3.47□□□□□ -1.85
SSX4O60224 SNORA26.8-201ENST00000391306 124 ntBASIC3.47□□□□□ -1.85
SSX4O60224 SKINT1L-201ENST00000401057 817 ntBASIC3.47□□□□□ -1.85
SSX4O60224 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.47□□□□□ -1.85
SSX4O60224 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.47□□□□□ -1.85
SSX4O60224 AC006946.1-201ENST00000429106 328 ntBASIC3.47□□□□□ -1.85
SSX4O60224 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.47□□□□□ -1.85
SSX4O60224 THAP5P1-201ENST00000439089 262 ntBASIC3.47□□□□□ -1.85
SSX4O60224 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SSX4O60224 MTND2P4-201ENST00000445034 1004 ntBASIC3.47□□□□□ -1.85
SSX4O60224 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms