Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.88□□□□□ -1.95
LSM1O15116 AC027309.2-201ENST00000520566 192 ntBASIC2.88□□□□□ -1.95
LSM1O15116 AC004486.1-201ENST00000546846 233 ntBASIC2.88□□□□□ -1.95
LSM1O15116 AC008127.2-201ENST00000549925 1075 ntBASIC2.88□□□□□ -1.95
LSM1O15116 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LSM1O15116 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.88□□□□□ -1.95
LSM1O15116 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.88□□□□□ -1.95
LSM1O15116 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.88□□□□□ -1.95
LSM1O15116 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.88□□□□□ -1.95
LSM1O15116 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.88□□□□□ -1.95
LSM1O15116 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.88□□□□□ -1.95
LSM1O15116 RPL12P50-201ENST00000603116 116 ntBASIC2.88□□□□□ -1.95
LSM1O15116 AL022099.1-201ENST00000604551 712 ntBASIC2.88□□□□□ -1.95
LSM1O15116 AL159169.3-201ENST00000608871 561 ntBASIC2.88□□□□□ -1.95
LSM1O15116 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.88□□□□□ -1.95
LSM1O15116 AC073592.7-201ENST00000623659 507 ntBASIC2.88□□□□□ -1.95
LSM1O15116 FO624990.1-201ENST00000636373 85 ntBASIC2.88□□□□□ -1.95
LSM1O15116 TAB3P1-202ENST00000452645 1634 ntBASIC2.88□□□□□ -1.95
LSM1O15116 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LSM1O15116 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.88□□□□□ -1.95
LSM1O15116 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.87□□□□□ -1.95
LSM1O15116 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LSM1O15116 RNU6-882P-201ENST00000391025 103 ntBASIC2.87□□□□□ -1.95
LSM1O15116 ATP5F1P3-201ENST00000397213 657 ntBASIC2.87□□□□□ -1.95
LSM1O15116 RNU2-15P-201ENST00000410692 191 ntBASIC2.87□□□□□ -1.95
LSM1O15116 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.87□□□□□ -1.95
LSM1O15116 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.87□□□□□ -1.95
LSM1O15116 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.87□□□□□ -1.95
LSM1O15116 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.87□□□□□ -1.95
LSM1O15116 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.87□□□□□ -1.95
LSM1O15116 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.87□□□□□ -1.95
LSM1O15116 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.87□□□□□ -1.95
LSM1O15116 RN7SL601P-201ENST00000471221 293 ntBASIC2.87□□□□□ -1.95
LSM1O15116 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.87□□□□□ -1.95
LSM1O15116 COL6A4P2-205ENST00000509855 506 ntBASIC2.87□□□□□ -1.95
LSM1O15116 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.87□□□□□ -1.95
LSM1O15116 AC108043.1-201ENST00000512696 574 ntBASIC2.87□□□□□ -1.95
LSM1O15116 RNU6-334P-201ENST00000517072 102 ntBASIC2.87□□□□□ -1.95
LSM1O15116 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
LSM1O15116 AP003049.1-201ENST00000529418 457 ntBASIC2.87□□□□□ -1.95
LSM1O15116 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.87□□□□□ -1.95
LSM1O15116 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.87□□□□□ -1.95
LSM1O15116 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.87□□□□□ -1.95
LSM1O15116 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.87□□□□□ -1.95
LSM1O15116 MIR3670-2-201ENST00000582974 65 ntBASIC2.87□□□□□ -1.95
LSM1O15116 MIR3670-1-201ENST00000584160 65 ntBASIC2.87□□□□□ -1.95
LSM1O15116 MIR3670-3-201ENST00000584855 65 ntBASIC2.87□□□□□ -1.95
LSM1O15116 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.87□□□□□ -1.95
LSM1O15116 AC083760.1-201ENST00000589621 670 ntBASIC2.87□□□□□ -1.95
LSM1O15116 GLUD1P4-201ENST00000590914 418 ntBASIC2.87□□□□□ -1.95
LSM1O15116 AL133507.1-201ENST00000605269 557 ntBASIC2.87□□□□□ -1.95
LSM1O15116 MIR3670-4-201ENST00000612260 65 ntBASIC2.87□□□□□ -1.95
LSM1O15116 MIR7112-201ENST00000616126 65 ntBASIC2.87□□□□□ -1.95
LSM1O15116 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
LSM1O15116 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.87□□□□□ -1.95
LSM1O15116 AC009812.4-201ENST00000569134 1805 ntBASIC2.86□□□□□ -1.95
LSM1O15116 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.86□□□□□ -1.95
LSM1O15116 Z82195.2-201ENST00000612348 18351 ntBASIC2.86□□□□□ -1.95
LSM1O15116 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.86□□□□□ -1.95
LSM1O15116 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
LSM1O15116 MIR22-201ENST00000362190 85 ntBASIC2.86□□□□□ -1.95
LSM1O15116 RNU5B-1-201ENST00000363286 116 ntBASIC2.86□□□□□ -1.95
LSM1O15116 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.86□□□□□ -1.95
LSM1O15116 AL353678.1-201ENST00000422735 741 ntBASIC2.86□□□□□ -1.95
LSM1O15116 NDUFB4P6-201ENST00000436819 366 ntBASIC2.86□□□□□ -1.95
LSM1O15116 AC006028.1-201ENST00000438379 402 ntBASIC2.86□□□□□ -1.95
LSM1O15116 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.86□□□□□ -1.95
LSM1O15116 PRDX3P3-201ENST00000447765 522 ntBASIC2.86□□□□□ -1.95
LSM1O15116 AL589880.1-201ENST00000448271 287 ntBASIC2.86□□□□□ -1.95
LSM1O15116 MRPL42P4-201ENST00000453267 443 ntBASIC2.86□□□□□ -1.95
LSM1O15116 RFC5P1-201ENST00000454419 874 ntBASIC2.86□□□□□ -1.95
LSM1O15116 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.86□□□□□ -1.95
LSM1O15116 AC034236.1-201ENST00000469891 373 ntBASIC2.86□□□□□ -1.95
LSM1O15116 AC117440.1-201ENST00000474107 571 ntBASIC2.86□□□□□ -1.95
LSM1O15116 PRELID3BP6-201ENST00000503839 571 ntBASIC2.86□□□□□ -1.95
LSM1O15116 WBP1LP4-201ENST00000505043 344 ntBASIC2.86□□□□□ -1.95
LSM1O15116 AC009901.1-201ENST00000506703 541 ntBASIC2.86□□□□□ -1.95
LSM1O15116 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.86□□□□□ -1.95
LSM1O15116 AC023632.1-201ENST00000518463 375 ntBASIC2.86□□□□□ -1.95
LSM1O15116 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LSM1O15116 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.86□□□□□ -1.95
LSM1O15116 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.86□□□□□ -1.95
LSM1O15116 AC034105.3-201ENST00000565294 442 ntBASIC2.86□□□□□ -1.95
LSM1O15116 ELOCP35-201ENST00000604289 336 ntBASIC2.86□□□□□ -1.95
LSM1O15116 AL021368.1-201ENST00000607490 540 ntBASIC2.86□□□□□ -1.95
LSM1O15116 AP001521.1-201ENST00000609150 300 ntBASIC2.86□□□□□ -1.95
LSM1O15116 CYCSP41-201ENST00000616920 296 ntBASIC2.86□□□□□ -1.95
LSM1O15116 MIR6075-201ENST00000620782 95 ntBASIC2.86□□□□□ -1.95
LSM1O15116 AC068880.4-201ENST00000623082 495 ntBASIC2.86□□□□□ -1.95
LSM1O15116 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.86□□□□□ -1.95
LSM1O15116 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.86□□□□□ -1.95
LSM1O15116 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.86□□□□□ -1.95
LSM1O15116 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.85□□□□□ -1.95
LSM1O15116 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.85□□□□□ -1.95
LSM1O15116 RNU6-173P-201ENST00000364215 104 ntBASIC2.85□□□□□ -1.95
LSM1O15116 RNA5SP72-201ENST00000364442 117 ntBASIC2.85□□□□□ -1.95
LSM1O15116 RNU6-878P-201ENST00000384578 110 ntBASIC2.85□□□□□ -1.95
LSM1O15116 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
LSM1O15116 AL451074.5-201ENST00000415894 435 ntBASIC2.85□□□□□ -1.95
LSM1O15116 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms