Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM38O00635 AC104260.1-201ENST00000616660 539 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 AC006338.1-201ENST00000618453 749 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TRIM38O00635 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM38O00635 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM38O00635 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
TRIM38O00635 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM38O00635 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM38O00635 PABPC1P9-201ENST00000426076 1612 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 CASC19-280ENST00000642102 1351 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TRIM38O00635 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM38O00635 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM38O00635 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM38O00635 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TRIM38O00635 MIR372-201ENST00000362225 67 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 RNA5SP502-201ENST00000362694 119 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 RNU5F-6P-201ENST00000362979 116 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 RNU4-91P-201ENST00000364778 135 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 U8.14-201ENST00000390843 143 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 AL583835.1-201ENST00000399570 407 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 AL445189.1-201ENST00000405722 338 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 USP9YP20-201ENST00000419224 558 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 AC092832.1-201ENST00000422934 400 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.28□□□□□ -1.72
TRIM38O00635 OR8F1P-201ENST00000425243 930 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 MTND4LP10-201ENST00000435146 291 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 RPL37P21-201ENST00000435890 276 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 UBE2V1P3-201ENST00000439651 417 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM38O00635 AC112653.1-201ENST00000443851 386 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM38O00635 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM38O00635 Z82190.1-201ENST00000454534 490 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 SNORA84-201ENST00000459229 133 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 RPL35P6-201ENST00000490024 372 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 AC078817.1-201ENST00000492623 435 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM38O00635 ARL2BPP4-201ENST00000506854 471 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM38O00635 AC020593.1-201ENST00000507399 299 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.28□□□□□ -1.72
TRIM38O00635 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM38O00635 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM38O00635 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.28□□□□□ -1.72
TRIM38O00635 AP004371.1-201ENST00000525240 214 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 PHBP17-201ENST00000528576 541 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM38O00635 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM38O00635 GTF2IP22-201ENST00000554443 182 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 ZNF519P2-201ENST00000557032 169 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 MIR4307-201ENST00000582802 84 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 AC005730.3-201ENST00000583067 366 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 AC015871.2-201ENST00000603605 948 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 AL160290.3-201ENST00000604869 165 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 MIR8059-201ENST00000620427 81 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 AC008785.1-201ENST00000624475 456 ntBASIC4.28□□□□□ -1.72
TRIM38O00635 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
TRIM38O00635 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM38O00635 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM38O00635 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM38O00635 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.73
TRIM38O00635 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM38O00635 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM38O00635 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM38O00635 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM38O00635 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM38O00635 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM38O00635 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM38O00635 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM38O00635 PNPT1P2-201ENST00000456768 2050 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM38O00635 RNU6-97P-201ENST00000363387 104 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 RNU6-259P-201ENST00000383999 107 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 RNU6-348P-201ENST00000384386 107 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TRIM38O00635 RPL17P50-201ENST00000396131 546 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 RNU6-712P-201ENST00000410558 100 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM38O00635 RPL17P12-201ENST00000413391 526 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 AC109780.2-201ENST00000413467 845 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM38O00635 AC138393.2-201ENST00000414742 246 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM38O00635 RPS7P15-201ENST00000415804 584 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM38O00635 Z97055.1-201ENST00000419730 712 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM38O00635 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM38O00635 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM38O00635 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM38O00635 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM38O00635 MTND1P9-201ENST00000453775 944 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 RN7SL691P-201ENST00000494487 301 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 AC078918.1-201ENST00000498515 228 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 AC139783.2-201ENST00000504847 1145 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 RNA5SP49-201ENST00000516450 115 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms