Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CACNA1AO00555 MIR1294-201ENST00000408503 142 ntBASIC1.98□□□□□ -2.09
CACNA1AO00555 RPL30P2-201ENST00000414021 291 ntBASIC1.98□□□□□ -2.09
CACNA1AO00555 AL118520.1-201ENST00000450770 291 ntBASIC1.98□□□□□ -2.09
CACNA1AO00555 FABP5P13-201ENST00000452144 328 ntBASIC1.98□□□□□ -2.09
CACNA1AO00555 AC002553.2-201ENST00000453217 340 ntBASIC1.98□□□□□ -2.09
CACNA1AO00555 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.98□□□□□ -2.09
CACNA1AO00555 AC104472.2-201ENST00000469035 601 ntBASIC1.98□□□□□ -2.09
CACNA1AO00555 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.98□□□□□ -2.09
CACNA1AO00555 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC1.98□□□□□ -2.09
CACNA1AO00555 AC009831.4-201ENST00000620744 325 ntBASIC1.98□□□□□ -2.09
CACNA1AO00555 AL133216.2-202ENST00000634512 349 ntBASIC1.98□□□□□ -2.09
CACNA1AO00555 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CACNA1AO00555 RNA5SP383-201ENST00000362934 120 ntBASIC1.98□□□□□ -2.09
CACNA1AO00555 AC009965.2-201ENST00000425328 970 ntBASIC1.98□□□□□ -2.09
CACNA1AO00555 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.98□□□□□ -2.09
CACNA1AO00555 AC022882.1-201ENST00000532142 501 ntBASIC1.98□□□□□ -2.09
CACNA1AO00555 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC1.98□□□□□ -2.09
CACNA1AO00555 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CACNA1AO00555 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
CACNA1AO00555 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.98□□□□□ -2.09
CACNA1AO00555 RNA5SP363-201ENST00000365072 115 ntBASIC1.97□□□□□ -2.09
CACNA1AO00555 AL358453.1-201ENST00000422522 250 ntBASIC1.97□□□□□ -2.09
CACNA1AO00555 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC1.97□□□□□ -2.09
CACNA1AO00555 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.97□□□□□ -2.09
CACNA1AO00555 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.97□□□□□ -2.09
CACNA1AO00555 CU459211.1-201ENST00000635667 749 ntBASIC1.97□□□□□ -2.09
CACNA1AO00555 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC1.97□□□□□ -2.09
CACNA1AO00555 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.97□□□□□ -2.09
CACNA1AO00555 RNA5SP210-201ENST00000391034 120 ntBASIC1.97□□□□□ -2.09
CACNA1AO00555 RPS12P23-201ENST00000419579 400 ntBASIC1.97□□□□□ -2.09
CACNA1AO00555 GTF2IP23-201ENST00000423746 351 ntBASIC1.97□□□□□ -2.09
CACNA1AO00555 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC1.97□□□□□ -2.09
CACNA1AO00555 GAPDHP27-201ENST00000447427 1020 ntBASIC1.97□□□□□ -2.09
CACNA1AO00555 RPS15AP1-201ENST00000457423 391 ntBASIC1.97□□□□□ -2.09
CACNA1AO00555 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.97□□□□□ -2.09
CACNA1AO00555 AC096992.1-201ENST00000459808 709 ntBASIC1.97□□□□□ -2.09
CACNA1AO00555 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.97□□□□□ -2.09
CACNA1AO00555 AC245036.5-201ENST00000596330 847 ntBASIC1.97□□□□□ -2.09
CACNA1AO00555 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC1.97□□□□□ -2.09
CACNA1AO00555 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.97□□□□□ -2.09
CACNA1AO00555 AC098657.3-201ENST00000620434 263 ntBASIC1.97□□□□□ -2.09
CACNA1AO00555 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.97□□□□□ -2.09
CACNA1AO00555 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.97□□□□□ -2.09
CACNA1AO00555 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.97□□□□□ -2.09
CACNA1AO00555 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CACNA1AO00555 RPS20P25-201ENST00000412447 352 ntBASIC1.96□□□□□ -2.09
CACNA1AO00555 RPS3AP44-201ENST00000425466 790 ntBASIC1.96□□□□□ -2.09
CACNA1AO00555 AL365396.1-201ENST00000430854 671 ntBASIC1.96□□□□□ -2.09
CACNA1AO00555 AC004263.1-201ENST00000479327 332 ntBASIC1.96□□□□□ -2.09
CACNA1AO00555 AC104564.1-201ENST00000493028 407 ntBASIC1.96□□□□□ -2.09
CACNA1AO00555 AP000857.1-201ENST00000532151 543 ntBASIC1.96□□□□□ -2.09
CACNA1AO00555 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.96□□□□□ -2.09
CACNA1AO00555 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.96□□□□□ -2.09
CACNA1AO00555 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.96□□□□□ -2.1
CACNA1AO00555 PROS2P-201ENST00000474651 1951 ntBASIC1.96□□□□□ -2.1
CACNA1AO00555 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CACNA1AO00555 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
CACNA1AO00555 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CACNA1AO00555 DYNLL1P6-201ENST00000503440 264 ntBASIC1.96□□□□□ -2.1
CACNA1AO00555 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC1.96□□□□□ -2.1
CACNA1AO00555 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.96□□□□□ -2.1
CACNA1AO00555 AC141257.3-201ENST00000572906 215 ntBASIC1.96□□□□□ -2.1
CACNA1AO00555 ZNF271P-202ENST00000465539 1970 ntBASIC1.96□□□□□ -2.1
CACNA1AO00555 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CACNA1AO00555 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CACNA1AO00555 AC009237.8-201ENST00000445492 379 ntBASIC1.95□□□□□ -2.1
CACNA1AO00555 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC1.95□□□□□ -2.1
CACNA1AO00555 RPS29P12-201ENST00000460178 152 ntBASIC1.95□□□□□ -2.1
CACNA1AO00555 AC147055.1-201ENST00000509261 750 ntBASIC1.95□□□□□ -2.1
CACNA1AO00555 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.95□□□□□ -2.1
CACNA1AO00555 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CACNA1AO00555 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.95□□□□□ -2.1
CACNA1AO00555 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.95□□□□□ -2.1
CACNA1AO00555 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.95□□□□□ -2.1
CACNA1AO00555 AC007182.2-201ENST00000489251 402 ntBASIC1.95□□□□□ -2.1
CACNA1AO00555 DUXAP5-201ENST00000529668 529 ntBASIC1.95□□□□□ -2.1
CACNA1AO00555 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.95□□□□□ -2.1
CACNA1AO00555 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.95□□□□□ -2.1
CACNA1AO00555 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CACNA1AO00555 Z98941.1-201ENST00000407764 100 ntBASIC1.94□□□□□ -2.1
CACNA1AO00555 AP000936.3-201ENST00000438127 255 ntBASIC1.94□□□□□ -2.1
CACNA1AO00555 RNU2-58P-201ENST00000516403 183 ntBASIC1.94□□□□□ -2.1
CACNA1AO00555 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.94□□□□□ -2.1
CACNA1AO00555 AC120053.1-201ENST00000607706 736 ntBASIC1.94□□□□□ -2.1
CACNA1AO00555 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CACNA1AO00555 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CACNA1AO00555 SNORA25.6-201ENST00000364121 118 ntBASIC1.94□□□□□ -2.1
CACNA1AO00555 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
CACNA1AO00555 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.94□□□□□ -2.1
CACNA1AO00555 YWHAZP7-201ENST00000436906 631 ntBASIC1.94□□□□□ -2.1
CACNA1AO00555 RN7SKP60-201ENST00000516985 239 ntBASIC1.94□□□□□ -2.1
CACNA1AO00555 MIR6132-201ENST00000622083 109 ntBASIC1.94□□□□□ -2.1
CACNA1AO00555 AL138955.1-201ENST00000622881 1040 ntBASIC1.94□□□□□ -2.1
CACNA1AO00555 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CACNA1AO00555 AC009902.3-201ENST00000606235 2172 ntBASIC1.94□□□□□ -2.1
CACNA1AO00555 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC1.93□□□□□ -2.1
CACNA1AO00555 AC127526.1-201ENST00000417526 366 ntBASIC1.93□□□□□ -2.1
CACNA1AO00555 AL445305.1-201ENST00000432577 575 ntBASIC1.93□□□□□ -2.1
CACNA1AO00555 RPS26P40-201ENST00000435209 294 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms