Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.52□□□□□ -2.01
RGPD3A6NKT7 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.52□□□□□ -2.01
RGPD3A6NKT7 ZNF192P1-203ENST00000565888 810 ntBASIC2.52□□□□□ -2.01
RGPD3A6NKT7 AC013562.2-201ENST00000611632 603 ntBASIC2.52□□□□□ -2.01
RGPD3A6NKT7 AC090897.3-201ENST00000636973 1157 ntBASIC2.52□□□□□ -2.01
RGPD3A6NKT7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RGPD3A6NKT7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
RGPD3A6NKT7 AC019129.1-201ENST00000403786 261 ntBASIC2.51□□□□□ -2.01
RGPD3A6NKT7 CBWD4P-201ENST00000445695 655 ntBASIC2.51□□□□□ -2.01
RGPD3A6NKT7 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.51□□□□□ -2.01
RGPD3A6NKT7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.51□□□□□ -2.01
RGPD3A6NKT7 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.51□□□□□ -2.01
RGPD3A6NKT7 MTCO1P30-201ENST00000515244 580 ntBASIC2.51□□□□□ -2.01
RGPD3A6NKT7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.51□□□□□ -2.01
RGPD3A6NKT7 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.51□□□□□ -2.01
RGPD3A6NKT7 AC106730.3-201ENST00000624568 641 ntBASIC2.51□□□□□ -2.01
RGPD3A6NKT7 SNORA50A-202ENST00000629536 136 ntBASIC2.51□□□□□ -2.01
RGPD3A6NKT7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.51□□□□□ -2.01
RGPD3A6NKT7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
RGPD3A6NKT7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RGPD3A6NKT7 RNA5SP295-201ENST00000362655 121 ntBASIC2.51□□□□□ -2.01
RGPD3A6NKT7 RNU1-51P-201ENST00000365345 176 ntBASIC2.51□□□□□ -2.01
RGPD3A6NKT7 RNY1P14-201ENST00000384426 108 ntBASIC2.51□□□□□ -2.01
RGPD3A6NKT7 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.51□□□□□ -2.01
RGPD3A6NKT7 RNU7-95P-201ENST00000459222 64 ntBASIC2.51□□□□□ -2.01
RGPD3A6NKT7 GTF2IP9-201ENST00000502460 301 ntBASIC2.51□□□□□ -2.01
RGPD3A6NKT7 OR4P1P-201ENST00000530808 1136 ntBASIC2.51□□□□□ -2.01
RGPD3A6NKT7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.51□□□□□ -2.01
RGPD3A6NKT7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.51□□□□□ -2.01
RGPD3A6NKT7 ISCA1P3-201ENST00000577104 373 ntBASIC2.51□□□□□ -2.01
RGPD3A6NKT7 AP005136.1-201ENST00000579765 429 ntBASIC2.51□□□□□ -2.01
RGPD3A6NKT7 AC067838.1-201ENST00000606064 577 ntBASIC2.51□□□□□ -2.01
RGPD3A6NKT7 AC010678.1-201ENST00000614118 713 ntBASIC2.51□□□□□ -2.01
RGPD3A6NKT7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.51□□□□□ -2.01
RGPD3A6NKT7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RGPD3A6NKT7 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RGPD3A6NKT7 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RGPD3A6NKT7 AL590084.1-201ENST00000407885 387 ntBASIC2.5□□□□□ -2.01
RGPD3A6NKT7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.5□□□□□ -2.01
RGPD3A6NKT7 AC104332.2-201ENST00000429959 156 ntBASIC2.5□□□□□ -2.01
RGPD3A6NKT7 AC022022.1-201ENST00000430304 178 ntBASIC2.5□□□□□ -2.01
RGPD3A6NKT7 AC129850.1-201ENST00000436203 508 ntBASIC2.5□□□□□ -2.01
RGPD3A6NKT7 RPS7P5-201ENST00000441482 581 ntBASIC2.5□□□□□ -2.01
RGPD3A6NKT7 RPL39P40-201ENST00000445481 146 ntBASIC2.5□□□□□ -2.01
RGPD3A6NKT7 AC009237.8-201ENST00000445492 379 ntBASIC2.5□□□□□ -2.01
RGPD3A6NKT7 AC007182.2-201ENST00000489251 402 ntBASIC2.5□□□□□ -2.01
RGPD3A6NKT7 RPL23AP63-201ENST00000498752 471 ntBASIC2.5□□□□□ -2.01
RGPD3A6NKT7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.5□□□□□ -2.01
RGPD3A6NKT7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.5□□□□□ -2.01
RGPD3A6NKT7 AL512283.1-201ENST00000606756 1384 ntBASIC2.5□□□□□ -2.01
RGPD3A6NKT7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.49□□□□□ -2.01
RGPD3A6NKT7 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RGPD3A6NKT7 MTCO3P21-201ENST00000430791 643 ntBASIC2.49□□□□□ -2.01
RGPD3A6NKT7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.49□□□□□ -2.01
RGPD3A6NKT7 AL590762.3-201ENST00000436372 640 ntBASIC2.49□□□□□ -2.01
RGPD3A6NKT7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.49□□□□□ -2.01
RGPD3A6NKT7 HSPE1P28-201ENST00000443139 211 ntBASIC2.49□□□□□ -2.01
RGPD3A6NKT7 AC012181.1-201ENST00000479895 423 ntBASIC2.49□□□□□ -2.01
RGPD3A6NKT7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.49□□□□□ -2.01
RGPD3A6NKT7 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
RGPD3A6NKT7 AC022790.1-201ENST00000522872 204 ntBASIC2.49□□□□□ -2.01
RGPD3A6NKT7 AL161713.1-201ENST00000555538 145 ntBASIC2.49□□□□□ -2.01
RGPD3A6NKT7 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.49□□□□□ -2.01
RGPD3A6NKT7 VN1R84P-201ENST00000593697 235 ntBASIC2.49□□□□□ -2.01
RGPD3A6NKT7 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.49□□□□□ -2.01
RGPD3A6NKT7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
RGPD3A6NKT7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RGPD3A6NKT7 SNORA31-201ENST00000362607 130 ntBASIC2.49□□□□□ -2.01
RGPD3A6NKT7 RNU6-392P-201ENST00000364926 101 ntBASIC2.49□□□□□ -2.01
RGPD3A6NKT7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
RGPD3A6NKT7 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.49□□□□□ -2.01
RGPD3A6NKT7 AL138785.1-201ENST00000425821 331 ntBASIC2.49□□□□□ -2.01
RGPD3A6NKT7 NEK4P1-201ENST00000433383 879 ntBASIC2.49□□□□□ -2.01
RGPD3A6NKT7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RGPD3A6NKT7 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.49□□□□□ -2.01
RGPD3A6NKT7 ARL2BPP2-201ENST00000550907 489 ntBASIC2.49□□□□□ -2.01
RGPD3A6NKT7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.49□□□□□ -2.01
RGPD3A6NKT7 AC068790.3-201ENST00000602988 553 ntBASIC2.49□□□□□ -2.01
RGPD3A6NKT7 RPP40P2-201ENST00000603596 712 ntBASIC2.49□□□□□ -2.01
RGPD3A6NKT7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
RGPD3A6NKT7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RGPD3A6NKT7 HMGB1P31-201ENST00000437242 427 ntBASIC2.48□□□□□ -2.01
RGPD3A6NKT7 AL138799.3-201ENST00000438968 350 ntBASIC2.48□□□□□ -2.01
RGPD3A6NKT7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.48□□□□□ -2.01
RGPD3A6NKT7 DNAJC19P4-201ENST00000440115 345 ntBASIC2.48□□□□□ -2.01
RGPD3A6NKT7 TRIM60P18-201ENST00000441518 828 ntBASIC2.48□□□□□ -2.01
RGPD3A6NKT7 USP9YP8-201ENST00000441913 500 ntBASIC2.48□□□□□ -2.01
RGPD3A6NKT7 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.48□□□□□ -2.01
RGPD3A6NKT7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.48□□□□□ -2.01
RGPD3A6NKT7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.48□□□□□ -2.01
RGPD3A6NKT7 RPS29P12-201ENST00000460178 152 ntBASIC2.48□□□□□ -2.01
RGPD3A6NKT7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.48□□□□□ -2.01
RGPD3A6NKT7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.48□□□□□ -2.01
RGPD3A6NKT7 LRRC37A5P-203ENST00000580181 585 ntBASIC2.48□□□□□ -2.01
RGPD3A6NKT7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
RGPD3A6NKT7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
RGPD3A6NKT7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.47□□□□□ -2.01
RGPD3A6NKT7 Y_RNA.224-201ENST00000364308 111 ntBASIC2.47□□□□□ -2.01
RGPD3A6NKT7 RNU2-68P-201ENST00000410878 191 ntBASIC2.47□□□□□ -2.01
RGPD3A6NKT7 RAD23BP2-201ENST00000416003 1207 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms