Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 RNU6-826P-201ENST00000516827 104 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 AC100870.1-201ENST00000522035 505 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 AL355836.1-201ENST00000555951 870 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 HMGB1P6-201ENST00000569046 646 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 BNIP3P19-201ENST00000605397 577 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 AC090116.1-201ENST00000615679 446 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 MIR1264-201ENST00000616374 69 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 AL163051.2-201ENST00000618976 735 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 AP003485.2-201ENST00000623636 610 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 ASNSP3-201ENST00000451989 1306 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 AC109315.1-201ENST00000584143 1347 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 MTND5P11-201ENST00000511037 1812 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 AC062016.1-201ENST00000355719 319 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 RNU6-444P-201ENST00000383988 108 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 RNU6-441P-201ENST00000384545 106 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 MIR634-201ENST00000385208 97 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 RPL17P50-201ENST00000396131 546 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 AL356057.3-201ENST00000402607 340 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 ATF1P1-201ENST00000406040 927 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 RNU6-712P-201ENST00000410558 100 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 RNU2-52P-201ENST00000410680 190 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 RPS15AP38-201ENST00000413110 372 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 UBE2V1P9-201ENST00000414760 368 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 RPLP0P7-201ENST00000416050 667 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 AL513477.1-202ENST00000417061 214 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 TMEM167AP1-201ENST00000423409 219 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 AC234775.1-201ENST00000454247 670 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 AC108729.2-201ENST00000476543 840 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 RN7SL432P-201ENST00000484057 298 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 MTND3P24-201ENST00000506306 329 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 PRELID3BP4-201ENST00000515476 571 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 HIGD1AP6-201ENST00000521833 279 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 AC233266.2-201ENST00000567067 528 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 AC016542.1-201ENST00000608259 493 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 AP001033.2-201ENST00000609701 1003 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 AC073569.3-201ENST00000619055 682 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 AC007998.5-201ENST00000622938 237 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 AC103798.2-201ENST00000624292 632 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 SCARNA15.3-201ENST00000626315 122 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 SCARNA4.1-201ENST00000628597 123 ntBASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.06□□□□□ -2.08
TRAV41A0A0B4J266 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 VTRNA1-1-201ENST00000363120 99 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 RNU6-1074P-201ENST00000383995 104 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 MIR34A-201ENST00000385130 110 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 AL139039.1-201ENST00000401900 692 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 MTND4LP20-201ENST00000402379 270 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 AL356057.2-201ENST00000403318 432 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 RPL7P30-201ENST00000420888 709 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 NUP35P1-201ENST00000422734 947 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 CR848007.2-201ENST00000424918 787 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 AC079780.1-201ENST00000428259 207 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 RPL23AP74-201ENST00000437246 471 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 MUPP-201ENST00000438111 566 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 AC104073.1-201ENST00000451988 151 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 RN7SL297P-201ENST00000483161 293 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 AIG1P1-201ENST00000503376 148 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 RAC1P5-201ENST00000512182 576 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 RNU1-103P-201ENST00000516502 125 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 HSPE1P7-201ENST00000604681 321 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 KATNBL1P1-201ENST00000605192 748 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 AL450270.1-201ENST00000606160 391 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 AC106028.5-201ENST00000610332 395 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 AC073968.1-201ENST00000618594 637 ntBASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms