Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 RNU6-156P-201ENST00000621869 107 ntBASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 FRG1BP-201ENST00000278882 761 ntBASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 RNU6-600P-201ENST00000362524 99 ntBASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 MIR142-201ENST00000384835 87 ntBASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 U8.13-201ENST00000390842 128 ntBASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 RPS27P27-201ENST00000498779 255 ntBASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 AC016877.3-201ENST00000606778 504 ntBASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 AC006963.1-201ENST00000624003 1052 ntBASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 RNU6-670P-201ENST00000364312 104 ntBASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 RNU6-98P-201ENST00000384173 107 ntBASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 AC092427.1-202ENST00000430569 476 ntBASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 AC010881.1-201ENST00000433830 235 ntBASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 TRBV1-201ENST00000476502 284 ntBASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 AC135628.1-201ENST00000568867 534 ntBASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 AC103710.1-201ENST00000610003 901 ntBASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 AL138880.2-201ENST00000616214 239 ntBASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 AL356266.1-201ENST00000623311 483 ntBASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.45□□□□□ -2.02
SCN10AQ9Y5Y9 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 MTND5P28-201ENST00000438005 1594 ntBASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 MIR221-201ENST00000385135 110 ntBASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 HMGB1P11-201ENST00000413899 637 ntBASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 AC005517.2-201ENST00000424673 553 ntBASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 ISCA1P6-201ENST00000427740 390 ntBASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 GSTA11P-201ENST00000452866 669 ntBASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 HMGN2P23-201ENST00000456759 269 ntBASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 RNA5SP200-201ENST00000516360 103 ntBASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 SCARNA16.3-201ENST00000516595 184 ntBASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 SNORA31.15-201ENST00000516771 132 ntBASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 AC044913.1-201ENST00000557200 430 ntBASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 AC107954.1-201ENST00000565906 727 ntBASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 PISRT1-201ENST00000626175 531 ntBASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 AC002543.1-201ENST00000299783 1954 ntBASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 AC008432.1-201ENST00000615912 1320 ntBASIC2.44□□□□□ -2.02
SCN10AQ9Y5Y9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 BTBD10P2-201ENST00000404779 676 ntBASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 PTP4A1P7-201ENST00000423476 514 ntBASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 RPL21P66-201ENST00000426566 466 ntBASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 TRIM60P18-201ENST00000441518 828 ntBASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AC010301.1-201ENST00000473936 355 ntBASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AP003467.2-201ENST00000520175 319 ntBASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 OR4T1P-201ENST00000554933 911 ntBASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AC090751.1-201ENST00000566966 267 ntBASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AL645944.1-201ENST00000603857 493 ntBASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AL354719.1-201ENST00000406535 843 ntBASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AL139156.1-201ENST00000412785 841 ntBASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 RPL36AP6-201ENST00000435770 321 ntBASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 RPS24P6-201ENST00000452670 400 ntBASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 ATP5F1P5-201ENST00000526403 760 ntBASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms