Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN16Q9Y5I7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN16Q9Y5I7 AC116096.1-201ENST00000566804 2314 ntBASIC3.81□□□□□ -1.8
CLDN16Q9Y5I7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 RNU6-1078P-201ENST00000364522 103 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 Y_RNA.548-201ENST00000384656 105 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 SNORD115.1-201ENST00000391109 76 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 RPL7P25-201ENST00000404151 721 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AC078974.1-201ENST00000411597 223 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 RPS7P15-201ENST00000415804 584 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AC108032.1-201ENST00000416706 207 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 BX890604.2-201ENST00000427883 474 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 VDAC1P3-201ENST00000434069 851 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 RPS24P1-201ENST00000438550 371 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AC073614.1-201ENST00000438690 650 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 RPS4XP4-201ENST00000443195 763 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 TPT1P7-201ENST00000458300 517 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 SNORD121B-201ENST00000458838 81 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 RPL38P1-201ENST00000460914 211 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 MTND1P3-201ENST00000484956 952 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 CDC42P4-201ENST00000510507 563 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 SNORA18.6-201ENST00000516792 115 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 RNU6-528P-201ENST00000516926 100 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 RNU6-201P-201ENST00000517100 61 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AC022616.6-201ENST00000520479 119 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 IFITM8P-201ENST00000522529 394 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AC245505.1-201ENST00000556398 224 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 MIR3682-201ENST00000581338 84 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 RNU6-87P-201ENST00000607561 108 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AC098614.4-201ENST00000607601 462 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 MIR6868-201ENST00000611215 58 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AL589743.7-201ENST00000612637 233 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AC005332.10-201ENST00000612725 619 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AC112484.5-201ENST00000624189 228 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AC092447.7-201ENST00000422212 1621 ntBASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN16Q9Y5I7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 MTND5P33-201ENST00000571250 1450 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC009902.3-201ENST00000606235 2172 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 SPRR2C-201ENST00000290702 219 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 RNA5SP479-201ENST00000364858 117 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 RPS3AP36-201ENST00000398190 775 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 PPIAP31-201ENST00000405422 495 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 RPL21P65-201ENST00000406094 466 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 MTCO3P12-201ENST00000416718 547 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 OR4K11P-201ENST00000431829 904 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 HSFY6P-201ENST00000445573 403 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 RPS11P1-201ENST00000451072 473 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC078785.3-201ENST00000476607 425 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 RPL23AP41-201ENST00000484754 458 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AL132838.2-201ENST00000492041 314 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 RPL23AP55-201ENST00000498163 452 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC146944.2-203ENST00000502493 354 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 FTH1P21-201ENST00000512179 511 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC139495.1-202ENST00000513164 354 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms