Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AP003072.2-201ENST00000527756 676 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AL133241.1-201ENST00000556832 487 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 RPL12P25-202ENST00000598100 674 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AC017083.3-201ENST00000609955 700 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AL590282.1-201ENST00000610379 1136 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 uc_338.12-201ENST00000616344 181 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 MIR7703-201ENST00000620784 77 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AL356321.1-201ENST00000621360 228 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AC018555.1-201ENST00000567548 1980 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AC244517.1-201ENST00000606030 2086 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 MFSD8-216ENST00000641147 4009 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 OR5J1P-201ENST00000313544 939 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 RNU1-14P-201ENST00000362759 152 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 RNU5A-8P-201ENST00000364102 114 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 RNU6-1078P-201ENST00000364522 103 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 RNY4P16-201ENST00000364768 94 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 RNU6-837P-201ENST00000391056 108 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 RPL7P60-201ENST00000397636 735 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AL590002.1-201ENST00000406554 418 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 RNA5SP36-201ENST00000410197 133 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 RNU4-78P-201ENST00000410940 126 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 JKAMPP1-201ENST00000413804 919 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AC137499.1-201ENST00000427602 88 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AL139415.2-201ENST00000431968 163 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AC011998.1-201ENST00000433403 117 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AC002486.1-201ENST00000435098 391 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 FTH1P1-201ENST00000437933 532 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 Z99127.3-201ENST00000448158 395 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 RPS17P13-201ENST00000448974 407 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 FGF7P3-201ENST00000454645 303 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AL672167.3-201ENST00000465951 960 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 RN7SL810P-201ENST00000493031 276 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AC023194.1-201ENST00000493084 308 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AC009646.1-201ENST00000510455 318 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 HIGD1AP5-201ENST00000529959 259 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AP003034.1-201ENST00000534621 422 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 TRAV8-5-201ENST00000537369 341 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AC092325.1-201ENST00000566449 554 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 SNORA59B-202ENST00000578183 701 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 COX6CP3-201ENST00000580869 223 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AC234771.5-201ENST00000600161 514 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AL031176.1-201ENST00000604554 466 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AC090948.1-201ENST00000607464 549 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AC004908.2-201ENST00000609090 574 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AC007014.2-201ENST00000615581 479 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AC112204.3-201ENST00000623822 332 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 MTND5P3-201ENST00000438536 1800 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 AC090337.1-201ENST00000579651 2074 ntBASIC4.39□□□□□ -1.71
PCDHA3Q9Y5H8 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 RNU4-12P-201ENST00000365233 139 ntBASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 RNU6-282P-201ENST00000365357 103 ntBASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 SNORA20.2-201ENST00000383922 131 ntBASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 RPS12P23-201ENST00000419579 400 ntBASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 MTCO2P19-201ENST00000427513 598 ntBASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 AC011742.1-201ENST00000431448 434 ntBASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 AC000111.3-201ENST00000433478 193 ntBASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 AL596276.1-201ENST00000434465 418 ntBASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 RPS29P33-201ENST00000456717 146 ntBASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 RPL35P6-201ENST00000490024 372 ntBASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 RN7SL691P-201ENST00000494487 301 ntBASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 ARL4AP2-201ENST00000507378 601 ntBASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.38□□□□□ -1.71
PCDHA3Q9Y5H8 ARL2BPP6-201ENST00000512757 439 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms