Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 AC104164.3-201ENST00000467363 1258 ntBASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 VN1R105P-201ENST00000486595 910 ntBASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 AC109464.2-201ENST00000510242 943 ntBASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 XKRY-201ENST00000510392 1100 ntBASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 AC017037.2-201ENST00000513850 890 ntBASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 AC093677.1-201ENST00000514414 678 ntBASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 RN7SKP18-201ENST00000516005 275 ntBASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 RNY4P37-201ENST00000516225 96 ntBASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 AADACP1-206ENST00000561502 1193 ntBASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 AC105224.1-201ENST00000587055 421 ntBASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 BNIP3P26-201ENST00000600827 554 ntBASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 AC005014.3-201ENST00000605985 190 ntBASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 AC006338.2-201ENST00000616864 791 ntBASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 AL357080.1-201ENST00000617394 239 ntBASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 AC011330.2-201ENST00000621680 635 ntBASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 AC011460.1-201ENST00000636268 1834 ntBASIC2.7□□□□□ -1.98
KCNIP3Q9Y2W7 Z82195.2-201ENST00000612348 18351 ntBASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 FRG1BP-201ENST00000278882 761 ntBASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 AL357075.1-201ENST00000404107 726 ntBASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 TIMM9P2-201ENST00000419324 266 ntBASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 AL035423.1-201ENST00000420331 213 ntBASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 TMEM167AP1-201ENST00000423409 219 ntBASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 RPL26P6-201ENST00000440913 438 ntBASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 RNU7-136P-201ENST00000458819 69 ntBASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 AC097493.1-201ENST00000463958 372 ntBASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 VN1R104P-201ENST00000505115 1009 ntBASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 RN7SKP43-201ENST00000516173 320 ntBASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 C1GALT1P3-201ENST00000522049 819 ntBASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 PARP1P2-201ENST00000556806 195 ntBASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 AC090615.1-201ENST00000577519 154 ntBASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 AC004696.1-201ENST00000614345 607 ntBASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 AL445264.1-201ENST00000621719 171 ntBASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.69□□□□□ -1.98
KCNIP3Q9Y2W7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 MTND4P9-201ENST00000507819 1346 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 AC008568.2-201ENST00000623862 2313 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 NACA3P-201ENST00000359690 648 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 RNU6-28P-201ENST00000362378 107 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 RNA5SP197-201ENST00000363357 119 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 RNU6-621P-201ENST00000364752 109 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 RNU6-413P-201ENST00000384115 107 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 PPIAP31-201ENST00000405422 495 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 MTATP6P20-201ENST00000414147 562 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 CCDC58P2-201ENST00000417131 366 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 AC007327.1-201ENST00000447461 264 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 FCF1P6-201ENST00000456841 595 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 PRELID3BP6-201ENST00000503839 571 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 AC103783.1-201ENST00000520506 373 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms