Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 Y_RNA.553-201ENST00000384670 102 ntBASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 AL583834.1-201ENST00000406943 343 ntBASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 RNU4-78P-201ENST00000410940 126 ntBASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 RN7SKP142-201ENST00000411236 328 ntBASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 AL353706.1-201ENST00000436728 494 ntBASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 EEF1E1P1-201ENST00000446998 430 ntBASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 AC093767.1-201ENST00000504523 156 ntBASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 HSPA8P13-201ENST00000523715 472 ntBASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 OR5M7P-201ENST00000526140 972 ntBASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 AC068587.4-201ENST00000533893 186 ntBASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 AC068276.1-201ENST00000605793 379 ntBASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 AC107214.2-201ENST00000608204 634 ntBASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 AC090425.2-201ENST00000608818 501 ntBASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 AL359715.5-201ENST00000623431 443 ntBASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.84□□□□□ -1.47
CDK11AQ9UQ88 AP001350.1-201ENST00000601906 1524 ntBASIC5.84□□□□□ -1.48
CDK11AQ9UQ88 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AP002907.1-201ENST00000606361 1430 ntBASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 RNU6-989P-201ENST00000362756 107 ntBASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 SNORD82-201ENST00000365530 70 ntBASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 RNU6-1181P-201ENST00000384191 106 ntBASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 HSPE1P26-201ENST00000405341 275 ntBASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 CYCSP46-201ENST00000423569 204 ntBASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 SNRPGP9-201ENST00000456025 225 ntBASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AC139783.2-201ENST00000504847 1145 ntBASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AC116347.2-201ENST00000514912 523 ntBASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 RN7SKP13-201ENST00000515933 244 ntBASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 RANP9-201ENST00000519957 271 ntBASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AL133457.1-201ENST00000564251 987 ntBASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 MAGOH2P-202ENST00000584384 429 ntBASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AC010591.1-201ENST00000603941 649 ntBASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AC092656.1-203ENST00000624134 423 ntBASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AC048347.1-201ENST00000624621 427 ntBASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AC025048.6-202ENST00000627667 438 ntBASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AC032011.1-201ENST00000611703 1549 ntBASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
CDK11AQ9UQ88 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 AC116096.1-201ENST00000566804 2314 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 GDI2P1-201ENST00000429312 1336 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 RNA5SP267-201ENST00000364893 126 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 SOD2P1-201ENST00000396543 562 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 AIMP1P1-201ENST00000418670 937 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 RPL7P30-201ENST00000420888 709 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 AL158156.1-201ENST00000422509 473 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 AL365184.2-201ENST00000431139 435 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 KCTD9P3-201ENST00000434597 1169 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 AC127537.2-201ENST00000439258 465 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 TRIM60P18-201ENST00000441518 828 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 AP000936.2-201ENST00000447151 681 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 PAXBP1P1-201ENST00000449315 447 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 AC106872.2-201ENST00000494303 480 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 AC093809.1-201ENST00000509155 340 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms