Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 RPL23AP31-201ENST00000456160 467 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 RPS29P26-201ENST00000477483 171 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 AC097462.2-201ENST00000504623 481 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 AC006390.1-201ENST00000508068 283 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 RN7SKP282-201ENST00000516824 299 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.12□□□□□ -1.91
CDH9Q9ULB4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH9Q9ULB4 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.12□□□□□ -1.91
CDH9Q9ULB4 EIF4BP1-201ENST00000554881 351 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 AL391156.1-201ENST00000554965 554 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 AC122134.1-202ENST00000569111 1201 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 LARP7P3-201ENST00000579888 337 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 COX6CP3-201ENST00000580869 223 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 AC015871.2-201ENST00000603605 948 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 RPL21P136-201ENST00000605378 396 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 AC091946.2-201ENST00000606105 291 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.12□□□□□ -1.91
CDH9Q9ULB4 AC231759.1-201ENST00000616455 597 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 AC068831.7-201ENST00000616954 363 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 AL353748.2-201ENST00000622148 471 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 AP000943.4-201ENST00000622912 357 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 AL137790.1-201ENST00000634283 177 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 MFSD8-245ENST00000641743 948 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH9Q9ULB4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CDH9Q9ULB4 RPL7P27-201ENST00000403775 720 ntBASIC3.11□□□□□ -1.91
CDH9Q9ULB4 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH9Q9ULB4 OR2B8P-201ENST00000432841 938 ntBASIC3.11□□□□□ -1.91
CDH9Q9ULB4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDH9Q9ULB4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH9Q9ULB4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH9Q9ULB4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH9Q9ULB4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.11□□□□□ -1.91
CDH9Q9ULB4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH9Q9ULB4 NAMPTP2-201ENST00000505629 1115 ntBASIC3.11□□□□□ -1.91
CDH9Q9ULB4 RNU6-1095P-201ENST00000516148 108 ntBASIC3.11□□□□□ -1.91
CDH9Q9ULB4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH9Q9ULB4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH9Q9ULB4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH9Q9ULB4 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDH9Q9ULB4 AC090666.1-201ENST00000578241 445 ntBASIC3.11□□□□□ -1.91
CDH9Q9ULB4 FAM60BP-201ENST00000578364 658 ntBASIC3.11□□□□□ -1.91
CDH9Q9ULB4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH9Q9ULB4 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH9Q9ULB4 AC006386.2-201ENST00000624491 75 ntBASIC3.11□□□□□ -1.91
CDH9Q9ULB4 AC012005.1-201ENST00000624575 75 ntBASIC3.11□□□□□ -1.91
CDH9Q9ULB4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDH9Q9ULB4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 AC093010.3-201ENST00000570269 15214 ntBASIC3.1□□□□□ -1.91
CDH9Q9ULB4 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 RNU6-236P-201ENST00000363886 106 ntBASIC3.1□□□□□ -1.91
CDH9Q9ULB4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 AL035405.1-201ENST00000400795 710 ntBASIC3.1□□□□□ -1.91
CDH9Q9ULB4 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 AC233728.2-201ENST00000425348 757 ntBASIC3.1□□□□□ -1.91
CDH9Q9ULB4 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 MTCYBP34-201ENST00000439552 670 ntBASIC3.1□□□□□ -1.91
CDH9Q9ULB4 AL162389.1-201ENST00000449233 177 ntBASIC3.1□□□□□ -1.91
CDH9Q9ULB4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 AC093278.1-201ENST00000494700 600 ntBASIC3.1□□□□□ -1.91
CDH9Q9ULB4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 AC027309.2-201ENST00000520566 192 ntBASIC3.1□□□□□ -1.91
CDH9Q9ULB4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 AC106782.4-201ENST00000568264 210 ntBASIC3.1□□□□□ -1.91
CDH9Q9ULB4 AC099785.1-201ENST00000605697 437 ntBASIC3.1□□□□□ -1.91
CDH9Q9ULB4 AL583856.2-201ENST00000606298 543 ntBASIC3.1□□□□□ -1.91
CDH9Q9ULB4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 AC087821.2-201ENST00000637086 450 ntBASIC3.1□□□□□ -1.91
CDH9Q9ULB4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CDH9Q9ULB4 API5P2-201ENST00000397055 1498 ntBASIC3.09□□□□□ -1.91
CDH9Q9ULB4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH9Q9ULB4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.09□□□□□ -1.91
CDH9Q9ULB4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CDH9Q9ULB4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDH9Q9ULB4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH9Q9ULB4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.09□□□□□ -1.91
CDH9Q9ULB4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDH9Q9ULB4 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.09□□□□□ -1.91
CDH9Q9ULB4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CDH9Q9ULB4 RNU6-1300P-201ENST00000391046 108 ntBASIC3.09□□□□□ -1.91
CDH9Q9ULB4 RPL21P3-201ENST00000395517 478 ntBASIC3.09□□□□□ -1.91
CDH9Q9ULB4 AL603865.2-201ENST00000401679 213 ntBASIC3.09□□□□□ -1.91
CDH9Q9ULB4 U3.42-201ENST00000408746 214 ntBASIC3.09□□□□□ -1.91
CDH9Q9ULB4 RNU2-15P-201ENST00000410692 191 ntBASIC3.09□□□□□ -1.91
CDH9Q9ULB4 NDUFB4P5-201ENST00000415445 361 ntBASIC3.09□□□□□ -1.91
CDH9Q9ULB4 HSPE1P1-201ENST00000421494 318 ntBASIC3.09□□□□□ -1.91
CDH9Q9ULB4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH9Q9ULB4 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
CDH9Q9ULB4 SETP8-201ENST00000435341 628 ntBASIC3.09□□□□□ -1.91
CDH9Q9ULB4 ARF4P4-201ENST00000439608 520 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms