Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 Y_RNA.422-201ENST00000384054 114 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 Y_RNA.576-201ENST00000384781 102 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 MT-TC-201ENST00000387405 66 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-821P-201ENST00000390995 107 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 RNU11-4P-201ENST00000391149 133 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 SNORA75.4-201ENST00000391278 119 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 RPL5P18-201ENST00000406671 891 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 RNU4-14P-201ENST00000410858 122 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-387P-201ENST00000411331 105 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 AC073465.2-201ENST00000440938 498 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 RPL23AP33-201ENST00000442301 452 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 AC020550.1-201ENST00000447385 163 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 Y_RNA.635-201ENST00000459041 101 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 RPL37P6-202ENST00000464216 403 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 VN1R17P-201ENST00000472048 1090 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 AC083904.1-201ENST00000487828 231 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 AC008897.1-201ENST00000494006 347 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 HMGB3P15-201ENST00000507326 574 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 HMGN1P9-201ENST00000515212 298 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-1088P-201ENST00000516850 104 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 AP000889.2-201ENST00000532684 490 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 CR383656.7-201ENST00000548164 174 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 AL163153.1-201ENST00000554223 283 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 DPPA3P3-201ENST00000603842 430 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 AC007546.1-201ENST00000619452 559 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 AL357559.1-201ENST00000622228 274 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 AC055839.1-201ENST00000634467 498 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 AL442639.1-201ENST00000625030 1899 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 AL137003.2-201ENST00000606924 2538 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 Y_RNA.395-201ENST00000383945 109 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 SNORA16A-201ENST00000384342 137 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 SNORA48.4-201ENST00000391089 134 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 RNA5SP241-201ENST00000391326 114 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 UBE2V1P2-201ENST00000397758 440 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 RPS16P5-201ENST00000406501 404 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 RPL7P46-201ENST00000425129 740 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 ELOCP18-201ENST00000434209 337 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 MRPL48P1-201ENST00000445390 636 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 AC007967.1-201ENST00000455422 1159 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 Y_RNA.631-201ENST00000459607 101 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 AC130509.1-201ENST00000464158 433 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 AC027575.1-201ENST00000481064 460 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-1038P-201ENST00000516516 104 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 AP005403.1-201ENST00000579720 229 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 MIR5583-1-201ENST00000580941 59 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 AC006504.6-201ENST00000590142 199 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 APOOP1-201ENST00000604695 592 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 AC245389.1-201ENST00000605141 529 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 AL008729.2-201ENST00000606393 473 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 AL355802.3-201ENST00000607571 545 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 Z82243.1-201ENST00000609432 473 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 API5P2-201ENST00000397055 1498 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms