Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 RNU5D-1-201ENST00000363299 116 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 SNORA80A-201ENST00000363922 136 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 U8.8-201ENST00000365399 135 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 RNU6-1074P-201ENST00000383995 104 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 SNORA41-201ENST00000384675 132 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 AC096632.1-201ENST00000427395 310 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 AC098826.1-201ENST00000433943 471 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 MRPS33P4-201ENST00000434892 317 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 MTND2P21-201ENST00000436242 1042 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 AP000852.1-201ENST00000472460 573 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 SETP11-201ENST00000473027 690 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 MTND3P24-201ENST00000506306 329 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 RN7SKP24-201ENST00000515888 284 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 EIF4BP1-201ENST00000554881 351 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 STMN1P1-201ENST00000617809 440 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 VN1R7P-201ENST00000619242 903 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 U4.3-201ENST00000621047 82 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 AC092608.3-201ENST00000625017 386 ntBASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 RNU6-543P-201ENST00000362576 108 ntBASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 RNU6-1151P-201ENST00000384684 107 ntBASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 MIR493-201ENST00000385254 89 ntBASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 DHFRP5-201ENST00000406944 564 ntBASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 AC092745.2-202ENST00000411880 369 ntBASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 UBE2V1P9-201ENST00000414760 368 ntBASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 RPL7P37-201ENST00000425095 738 ntBASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 LSM1P1-201ENST00000438629 273 ntBASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 AC104389.3-201ENST00000445629 235 ntBASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 RPL23AP45-201ENST00000476406 468 ntBASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 AP000867.2-201ENST00000532468 320 ntBASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 RPL23AP84-201ENST00000571193 464 ntBASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 AC012254.4-201ENST00000588843 273 ntBASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 AC008739.2-201ENST00000597006 317 ntBASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 RPL12P50-201ENST00000603116 116 ntBASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 HSPE1P7-201ENST00000604681 321 ntBASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 AC106028.5-201ENST00000610332 395 ntBASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 AC073968.1-201ENST00000618594 637 ntBASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 AC010297.1-201ENST00000623948 149 ntBASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VPS29Q9UBQ0 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 MIR196B-201ENST00000384852 84 ntBASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 MIR483-201ENST00000385070 76 ntBASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 RNA5SP181-201ENST00000410246 98 ntBASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 RNA5SP184-201ENST00000411071 108 ntBASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 AC092638.1-201ENST00000411966 1275 ntBASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 TMEM167AP1-201ENST00000423409 219 ntBASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 RPL23AP83-201ENST00000434984 473 ntBASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 AL590762.3-201ENST00000436372 640 ntBASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 RAB11AP1-201ENST00000442978 646 ntBASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 AL359385.1-201ENST00000456509 365 ntBASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 RNA5SP320-201ENST00000516263 124 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms