Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC068446.3-201ENST00000555285 382 ntBASIC2.59□□□□□ -1.99
PHRF1Q9P1Y6 MIR4303-201ENST00000581299 66 ntBASIC2.59□□□□□ -1.99
PHRF1Q9P1Y6 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.59□□□□□ -1.99
PHRF1Q9P1Y6 AP001148.1-201ENST00000624124 2359 ntBASIC2.58□□□□□ -2
PHRF1Q9P1Y6 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
PHRF1Q9P1Y6 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PHRF1Q9P1Y6 RSL24D1P2-201ENST00000445584 366 ntBASIC2.58□□□□□ -2
PHRF1Q9P1Y6 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.58□□□□□ -2
PHRF1Q9P1Y6 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.58□□□□□ -2
PHRF1Q9P1Y6 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.58□□□□□ -2
PHRF1Q9P1Y6 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.58□□□□□ -2
PHRF1Q9P1Y6 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.58□□□□□ -2
PHRF1Q9P1Y6 DUXAP3-201ENST00000603616 594 ntBASIC2.58□□□□□ -2
PHRF1Q9P1Y6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.58□□□□□ -2
PHRF1Q9P1Y6 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.58□□□□□ -2
PHRF1Q9P1Y6 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PHRF1Q9P1Y6 MIR7-2-201ENST00000384970 110 ntBASIC2.57□□□□□ -2
PHRF1Q9P1Y6 RNU6-1320P-201ENST00000390838 107 ntBASIC2.57□□□□□ -2
PHRF1Q9P1Y6 RNU6-1269P-201ENST00000391139 107 ntBASIC2.57□□□□□ -2
PHRF1Q9P1Y6 AC009237.8-201ENST00000445492 379 ntBASIC2.57□□□□□ -2
PHRF1Q9P1Y6 RNU6-599P-201ENST00000459383 107 ntBASIC2.57□□□□□ -2
PHRF1Q9P1Y6 RNU6-1193P-201ENST00000459461 107 ntBASIC2.57□□□□□ -2
PHRF1Q9P1Y6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.57□□□□□ -2
PHRF1Q9P1Y6 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
PHRF1Q9P1Y6 RN7SKP96-201ENST00000516948 297 ntBASIC2.57□□□□□ -2
PHRF1Q9P1Y6 snoZ278.1-201ENST00000517059 112 ntBASIC2.57□□□□□ -2
PHRF1Q9P1Y6 RNU6-368P-201ENST00000620928 107 ntBASIC2.57□□□□□ -2
PHRF1Q9P1Y6 RNU6-538P-201ENST00000622329 107 ntBASIC2.57□□□□□ -2
PHRF1Q9P1Y6 AC009452.1-201ENST00000640823 606 ntBASIC2.57□□□□□ -2
PHRF1Q9P1Y6 MTCO1P14-201ENST00000441695 1559 ntBASIC2.57□□□□□ -2
PHRF1Q9P1Y6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PHRF1Q9P1Y6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
PHRF1Q9P1Y6 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.57□□□□□ -2
PHRF1Q9P1Y6 RNU6-1263P-201ENST00000384601 106 ntBASIC2.57□□□□□ -2
PHRF1Q9P1Y6 RPL5P19-201ENST00000404228 893 ntBASIC2.57□□□□□ -2
PHRF1Q9P1Y6 HMGN2P35-201ENST00000412164 270 ntBASIC2.57□□□□□ -2
PHRF1Q9P1Y6 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.57□□□□□ -2
PHRF1Q9P1Y6 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.57□□□□□ -2
PHRF1Q9P1Y6 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.57□□□□□ -2
PHRF1Q9P1Y6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.57□□□□□ -2
PHRF1Q9P1Y6 HMGB1P1-201ENST00000522557 636 ntBASIC2.57□□□□□ -2
PHRF1Q9P1Y6 DNAJC19P9-201ENST00000555084 351 ntBASIC2.57□□□□□ -2
PHRF1Q9P1Y6 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.57□□□□□ -2
PHRF1Q9P1Y6 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.57□□□□□ -2
PHRF1Q9P1Y6 RPL23AP78-201ENST00000599928 470 ntBASIC2.57□□□□□ -2
PHRF1Q9P1Y6 AC011890.2-201ENST00000613393 294 ntBASIC2.57□□□□□ -2
PHRF1Q9P1Y6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
PHRF1Q9P1Y6 METTL21EP-201ENST00000298105 713 ntBASIC2.56□□□□□ -2
PHRF1Q9P1Y6 RPS15AP12-201ENST00000419498 388 ntBASIC2.56□□□□□ -2
PHRF1Q9P1Y6 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.56□□□□□ -2
PHRF1Q9P1Y6 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC2.56□□□□□ -2
PHRF1Q9P1Y6 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.56□□□□□ -2
PHRF1Q9P1Y6 RPL23AP76-201ENST00000441860 458 ntBASIC2.56□□□□□ -2
PHRF1Q9P1Y6 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.56□□□□□ -2
PHRF1Q9P1Y6 MTCO1P42-201ENST00000457379 726 ntBASIC2.56□□□□□ -2
PHRF1Q9P1Y6 snoU13.18-201ENST00000459483 104 ntBASIC2.56□□□□□ -2
PHRF1Q9P1Y6 RNA5SP182-201ENST00000516064 82 ntBASIC2.56□□□□□ -2
PHRF1Q9P1Y6 RNU6-943P-201ENST00000516960 98 ntBASIC2.56□□□□□ -2
PHRF1Q9P1Y6 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.56□□□□□ -2
PHRF1Q9P1Y6 AL121839.1-201ENST00000556233 1185 ntBASIC2.56□□□□□ -2
PHRF1Q9P1Y6 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.56□□□□□ -2
PHRF1Q9P1Y6 RPP40P2-201ENST00000603596 712 ntBASIC2.56□□□□□ -2
PHRF1Q9P1Y6 AF127577.6-201ENST00000623352 2191 ntBASIC2.55□□□□□ -2
PHRF1Q9P1Y6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PHRF1Q9P1Y6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PHRF1Q9P1Y6 MIR337-201ENST00000362281 93 ntBASIC2.55□□□□□ -2
PHRF1Q9P1Y6 MTND4LP21-201ENST00000415303 295 ntBASIC2.55□□□□□ -2
PHRF1Q9P1Y6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.55□□□□□ -2
PHRF1Q9P1Y6 DPPA2P1-201ENST00000428060 556 ntBASIC2.55□□□□□ -2
PHRF1Q9P1Y6 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
PHRF1Q9P1Y6 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.55□□□□□ -2
PHRF1Q9P1Y6 MTAPP1-201ENST00000489154 819 ntBASIC2.55□□□□□ -2
PHRF1Q9P1Y6 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.55□□□□□ -2
PHRF1Q9P1Y6 PRELID2P1-201ENST00000552837 301 ntBASIC2.55□□□□□ -2
PHRF1Q9P1Y6 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.55□□□□□ -2
PHRF1Q9P1Y6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.55□□□□□ -2
PHRF1Q9P1Y6 AC010329.2-201ENST00000595195 2737 ntBASIC2.55□□□□□ -2
PHRF1Q9P1Y6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
PHRF1Q9P1Y6 SNORA51.11-201ENST00000384442 131 ntBASIC2.54□□□□□ -2
PHRF1Q9P1Y6 RNA5SP181-201ENST00000410246 98 ntBASIC2.54□□□□□ -2
PHRF1Q9P1Y6 RPL23AP39-201ENST00000415533 405 ntBASIC2.54□□□□□ -2
PHRF1Q9P1Y6 AC104332.2-201ENST00000429959 156 ntBASIC2.54□□□□□ -2
PHRF1Q9P1Y6 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.54□□□□□ -2
PHRF1Q9P1Y6 RPL23AP7-203ENST00000449021 469 ntBASIC2.54□□□□□ -2
PHRF1Q9P1Y6 AL109741.2-201ENST00000455561 343 ntBASIC2.54□□□□□ -2
PHRF1Q9P1Y6 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.54□□□□□ -2
PHRF1Q9P1Y6 TRMT112P2-201ENST00000512910 132 ntBASIC2.54□□□□□ -2
PHRF1Q9P1Y6 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PHRF1Q9P1Y6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.54□□□□□ -2
PHRF1Q9P1Y6 MTND2P13-201ENST00000577438 1039 ntBASIC2.54□□□□□ -2
PHRF1Q9P1Y6 AC007687.1-201ENST00000602704 304 ntBASIC2.54□□□□□ -2
PHRF1Q9P1Y6 AC000367.1-201ENST00000452711 1766 ntBASIC2.54□□□□□ -2
PHRF1Q9P1Y6 ZNF720P1-201ENST00000562403 1939 ntBASIC2.54□□□□□ -2
PHRF1Q9P1Y6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PHRF1Q9P1Y6 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PHRF1Q9P1Y6 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.53□□□□□ -2
PHRF1Q9P1Y6 SNRPGP9-201ENST00000456025 225 ntBASIC2.53□□□□□ -2
PHRF1Q9P1Y6 AC073901.1-201ENST00000462471 408 ntBASIC2.53□□□□□ -2
PHRF1Q9P1Y6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.53□□□□□ -2
PHRF1Q9P1Y6 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms